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| Job Description | P0AFG6 | | Confidence | 36.81% | Date | Thu Jan 5 11:26:10 GMT 2012 |
| Rank | 121 | Aligned Residues | 21 |
| % Identity | 19% | Template | c3bwrC_ |
| PDB info |
PDB header:viral protein | Chain: C: PDB Molecule:capsid protein vp1; |
PDBTitle: sv40 vp1 pentamer in complex with gm1 oligosaccharide
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| Resolution | 2.25 Å |
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1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . |
| Predicted Secondary structure | |
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| Query Sequence | |
M | S | S | V | D | I | L | V | P | D | L | P | E | S | V | A | D | A | T | V | A | T | W |
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| Alig confidence | |
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| Template Conservation | |
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| Template Sequence | |
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| Template Known Secondary structure | |
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| Template Predicted Secondary structure | |
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| Template SS confidence | |
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90 | . | |
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. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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