Job Description P0AFG6 Confidence 99.71% Date Thu Jan 5 11:26:10 GMT 2012 Rank 24 Aligned Residues 133 % Identity 28% Template c2xt6B_ PDB info PDB header:lyase Chain: B: PDB Molecule:2-oxoglutarate decarboxylase; PDBTitle: crystal structure of mycobacterium smegmatis alpha-ketoglutarate2 decarboxylase homodimer (orthorhombic form) Resolution 2.74 Å

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		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	E	V	N	M	K	P	I	M	D	L	R	K	Q	Y	G	E	A	F	E	K	R	H	G	I	R	L	G	F	M	S	F	Y	V	K	A	V	V	E	A	L	K	R	Y	P	E	V	N	A	S	I	D	G	D	D	V	V	Y	H	N	Y	F	D	V	S	M	A	V	S	T	P	R	G	L	V	T	P	V	L
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.
Template Sequence		V	R	A	I	P	A	K	L	M	I	D	N	R	V	V	I	N	N	H	L	K	R	T	R	G	G	K	I	S	F	T	H	L	L	G	Y	A	I	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	L	G	L	A	V	.	.	.	.	.	.	.	V	A	A	I
Template Known Secondary structure																								T	T																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.																							.	.	170	.	.	.	.								.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	V	D	T	L	G	M	A	D	I	E	K	K	I	K	E	L	A	V	K	G	R	D	G	K	L	T	V	E	D	L	T	G	G	N	F	T	I	T	N	G	G	V	F	G	S	L	M	S	T	P	I	I	N	P	P	Q	S	A	I	L	G	M	H	A	I	K	D	R	P	M	A	V	N	G	Q	V	E	I
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Sequence		K	R	C	E	T	M	R	F	G	Q	F	I	A	A	Y	E	D	I	V	R	R	A	R	D	G	K	L	T	A	E	D	F	S	G	V	T	I	S	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	A	G	A	M	E	S	E	E	R	I	A	.	.	D	L	G	I
Template Known Secondary structure				G	G	G																		T	T	T				G	G	G	T	S	S		S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B						T	T				.	.			T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.																						.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	M	M	Y	L	A	L	S	Y	D	H	R	L	I	D	G	R	E	S	V	G	F	L	V	T	I	K	E	L	L	E	D
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.
Template Sequence		G	K	L	I	T	L	T	S	.	.	.	.	.	.	.	.	G	A	E	S	G	D	F	L	R	T	I	H	Q	L	L	L	D
Template Known Secondary structure										.	.	.	.	.	.	.	.															T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310									.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions