Job Description P0AFG6 Confidence 42.19% Date Thu Jan 5 11:26:10 GMT 2012 Rank 117 Aligned Residues 159 % Identity 14% Template c2xhgA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:tyrocidine synthetase a; PDBTitle: crystal structure of the epimerization domain from the initiation2 module of tyrocidine biosynthesis Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	A	R	S	E	K	R	V	P	M	T	R	L	R	K	R	V	A	E	R	L	L	E	A	K	N	S	T	A	M	L	T	T	F	N	E	V	N	M	K	P	I	M	D	L	R	K	Q	Y	G	E	A	F	E	K	R	H	G	I	R	L	G	F	M	S	F	Y	V	K	A	V	V	E	A	L	K	R	Y
Query Conservation
Alig confidence																					.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	D	Q	G	I	I	A	G	N	V	P	L	T	P	I	Q	K	W	F	.	.	.	F	G	K	N	F	T	N	T	G	H	W	N	Q	S	S	V	L	Y	R	P	E	G	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	V	I	Q	S	V	M	D	K	I	I	E	H	H
Template Known Secondary structure					S																.	.	.			T	T		T	T	T	T		B									T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															S
Template Predicted Secondary structure																					.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	V	N	A	S	I	D	G	D	D	V	V	Y	H	N	Y	F	D	V	S	M	A	V	S	T	P	R	G	L	V	T	P	V	L	R	D	V	D	T	L	G	M	A	D	I	E	K	K	I	K	E	L	A	V	K	G	R	D	G	K	L	T	V	E	D	L	T	G	G	N	F	T	I	T	N	G	G	V	F
Query Conservation
Alig confidence													.	.	.	.	.	.	.																																												.	.	.	.						.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.																																												.	.	.	.						.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	L	R	M	V	Y	Q	H	E	N	.	.	.	.	.	.	.	G	N	V	V	Q	H	N	R	G	L	G	G	Q	L	Y	D	F	F	S	Y	N	L	T	A	Q	P	D	V	Q	Q	A	I	E	A	E	T	Q	R	L	H	S	S	M	.	.	.	.	N	L	Q	E	G	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	G	G	G						G	G	.	.	.	.	.	.	.	G									S	S	S											T	T		S															T	T		.	.	.	.		T	T	T		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.																																												.	.	.	.						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.								.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	L	M	S	T	P	I	I	N	P	P	Q	S	A	I	L	G	M	H	A	I	K	D	R	P	M	A	V	N	G	Q	V	E	I	L	P	M	M	Y	L	A	L	S	Y	D	H	R	L	I	D	G	R	E	S	V	G	F	L	V	T	I	K	E	L	L	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	P	L	V	K	V	A	L	F	Q	T	L	H	G	D	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	L	A	I	H	H	L	V	V	D	G	I	S	W	R	I	L	F	E	D	L	A	T	G	Y	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.											T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
												125	.	.	.	.	130	.	.	.	.	.	.	.	.	.																140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions