Job Description P0AFG6 Confidence 78.58% Date Thu Jan 5 11:26:10 GMT 2012 Rank 98 Aligned Residues 182 % Identity 14% Template c2jgpA_ PDB info PDB header:ligase Chain: A: PDB Molecule:tyrocidine synthetase 3; PDBTitle: structure of the tycc5-6 pcp-c bidomain of the tyrocidine2 synthetase tycc Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.						.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																																										.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.
Query Sequence		G	G	R	L	T	R	E	D	V	E	K	H	L	A	K	A	P	A	K	E	S	A	P	A	A	A	A	P	A	A	Q	P	A	L	A	A	R	S	E	K	R	V	P	M	T	R	L	R	K	R	V	A	E	R	L	L	.	.	.	.	.	E	A	K	N	S	T	A	M	L	T	T	F	N	E	V	N	M	K	P
Query Conservation																																																										.	.	.	.	.
Alig confidence																																																										.	.	.	.	.
Template Conservation
Template Sequence		Q	V	D	I	P	L	R	I	L	F	E	K	P	T	I	Q	E	L	A	A	F	I	E	E	T	A	K	G	N	V	F	S	I	E	P	V	Q	K	Q	A	Y	Y	P	V	S	S	A	Q	K	R	M	Y	I	L	D	Q	F	E	G	V	G	I	S	Y	N	M	P	S	T	M	L	I	E	G	K	L	E	R	T	R
Template Known Secondary structure			B										S		B													T	T	B	T	T									S	S																	T			T	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		I	M	D	L	R	K	Q	Y	G	E	A	F	E	K	R	H	G	I	R	L	G	F	M	S	F	Y	V	K	A	V	V	E	A	L	K	R	Y	P	E	V	N	A	S	I	D	G	D	D	V	V	Y	H	N	Y	F	D	V	S	M	A	V	S	T	P	R	G	L	V	T	P	V	L	R	D	V	D	.	T	L	G
Query Conservation																																																																														.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	Q	R	L	I	A	R	H	E	S	L	R	T	S	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	N	G	E	P	V	Q	N	I	H	E	D	V	P	F	A	L	A
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										G	G	G	G					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T								S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		138	.	140																										.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.																	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	D	I	E	K	K	I	K	E	L	A	V	K	G	R	D	G	K	L	T	V	E	D	L	T	G	G	N	F	T	I	T	N	G	G	V	F	G	S	L	M	S	T	P	I	I	N	P	P	Q	S	A	I	L	G	M	H	A	I	K	D	R	P	M	A	V	N	G	Q	V	E	I	L	P	M	M	Y	L	A
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	S	E	V	T	E	E	E	A	R	E	L	V	S	S	L	V	Q	P	F	D	L	E	V	A	P	L	I	R	V	S	L	L	K	I	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	Y	V	L	F
Template Known Secondary structure																	T						T	T	S	S												T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.																																						.	.	.	.	.	.
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	Y	D	H	R	L	I	D	G	R	E	S	V	G	F	L	V	T	I	K	E	L	L	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	D	M	H	H	S	I	S	D	G	V	S	S	G	I	L	L	A	E	W	V	Q	L	Y	Q	G
Template Known Secondary structure					B	G	G	G																		T	T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions