Job Description P0AFG6 Confidence 100.00% Date Thu Jan 5 11:26:10 GMT 2012 Rank 3 Aligned Residues 230 % Identity 30% Template c2ii4C_ PDB info PDB header:transferase Chain: C: PDB Molecule:lipoamide acyltransferase component of branched-chain PDBTitle: crystal structure of a cubic core of the dihydrolipoamide2 acyltransferase (e2b) component in the branched-chain alpha-ketoacid3 dehydrogenase complex (bckdc), coenzyme a-bound form Resolution 2.59 Å

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		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	E	K	R	V	P	M	T	R	L	R	K	R	V	A	E	R	L	L	E	A	K	N	S	T	A	M	L	T	T	F	N	E	V	N	M	K	P	I	M	D	L	R	K	Q	Y	G	E	A	F	E	K	R	H	G	I	R	L	G	F	M	S	F	Y	V	K	A	V	V	E	A	L	K	R	Y	P	E	V	N
Query Conservation
Alig confidence																									.																															.
Template Conservation																									.																															.
Template Sequence		G	K	D	R	T	E	P	V	K	G	F	H	K	A	M	V	K	T	M	S	A	A	L	.	K	I	P	H	F	G	Y	C	D	E	V	D	L	T	E	L	V	K	L	R	E	E	L	K	P	I	A	F	A	R	.	G	I	K	L	S	F	M	P	F	F	L	K	A	A	S	L	G	L	L	Q	F	P	I	L	N
Template Known Secondary structure											T	T											G	G	.	G	S																											T	T	.	T					S																G	G	G	S
Template Predicted Secondary structure																									.																															.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		254	.	.	.	.			.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		A	S	I	D	G	.	.	D	D	V	V	Y	H	N	Y	F	D	V	S	M	A	V	S	T	P	R	G	L	V	T	P	V	L	R	D	V	D	T	L	G	M	A	D	I	E	K	K	I	K	E	L	A	V	K	G	R	D	G	K	L	T	V	E	D	L	T	G	G	N	F	T	I	T	N	G	G	V	F	G	S
Query Conservation							.	.
Alig confidence							.	.
Template Conservation
Template Sequence		A	S	V	D	E	N	C	Q	N	I	T	Y	K	A	S	H	N	I	G	I	A	M	D	T	E	Q	G	L	I	V	P	N	V	K	N	V	Q	I	R	S	I	F	E	I	A	T	E	L	N	R	L	Q	K	L	G	S	A	G	Q	L	S	T	N	D	L	I	G	G	T	F	T	L	S	N	I	G	S	I	G	G
Template Known Secondary structure						T	T	S							S	S										T	T								T	T	G	G	G																		T	T	T								S									G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		L	M	S	T	P	I	I	N	P	P	Q	S	A	I	L	G	M	H	A	I	K	D	R	P	M	A	V	.	N	G	Q	V	E	I	L	P	M	M	Y	L	A	L	S	Y	D	H	R	L	I	D	G	R	E	S	V	G	F	L	V	T	I	K	E	L	L	E	D	P	T	R	L	L	L	D	V
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		T	Y	A	K	P	V	I	L	P	P	E	V	A	I	G	A	L	G	T	I	K	A	L	P	R	F	N	E	K	G	E	V	C	K	A	Q	I	M	N	V	S	W	S	A	D	H	R	I	I	D	G	A	T	V	S	R	F	S	N	L	W	K	S	Y	L	E	N	P	A	F	M	L	L	D	L
Template Known Secondary structure		S								T	T																		T	T	S																T	T	T																				T
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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