Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFG6
Confidence99.89%DateThu Jan 5 11:26:10 GMT 2012
Rank13Aligned Residues91
% Identity34%Templatec2dncA_
PDB info PDB header:transferaseChain: A: PDB Molecule:pyruvate dehydrogenase protein x component; PDBTitle: solution structure of rsgi ruh-054, a lipoyl domain from2 human 2-oxoacid dehydrogenase
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60...... ...70.........
Predicted Secondary structure 































.



Query SS confidence 

































































.












Query Sequence  MSSVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGT. TVTSRQILGRLRE
Query Conservation 

  

 

 

    

 
  
 

 

 
  

 
 






  

 

  
 
  


 

 . 
 

  

 
  
Alig confidence 

.






























































.












Template Conservation    .
 
 

 

     
 
  
 
  

 
  

 
 



 
    
 
   
 
    
  

  
  
  

 
  
Template Sequence  SG. IKILMPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVE
Template Known Secondary structure 

.



STT
S
SS
TT

TTS
SS

SS

SS
TT


SS

Template Predicted Secondary structure 

.



































Template SS confidence 















































































   6. ..10.........20.........30.........40.........50.........60.........70.........80....
 
   80.........90..
Predicted Secondary structure 












Query SS confidence 












Query Sequence  GNSAGKETSAKSE
Query Conservation               
Alig confidence 












Template Conservation    
       
 
Template Sequence  EGEDWKHVSGPSS
Template Known Secondary structure  TTS
SS


SSS
Template Predicted Secondary structure 












Template SS confidence 












   85....90.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions