Return to main results Retrieve Phyre Job Id

Job DescriptionP45522
Confidence96.10%DateThu Jan 5 12:02:52 GMT 2012
Rank242Aligned Residues103
% Identity18%Templated1ldna1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains LDH N-terminal domain-like
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   397..400.........410.........420.... .....430.........440.. .......450.........460.........470..
Predicted Secondary structure 











..



..












Query SS confidence 



























. .

















. .





























Query Sequence  NDDKPQVIVVGFGRFGQVIGRLLMANKM. . RITVLERDISAVNLMRKY. . GYKVYYGDATQVDLLRSAGAEAAESIVITC
Query Conservation        


 
 
  
  

  
     ..    

 
   
      ..
     

      
  


  
   
   
Alig confidence 



























..

















..





























Template Conservation       







 

  

  

       
 
 
            
                   
   

 


  
Template Sequence  NNGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICA
Template Known Secondary structure  TTTS


ST

S
SSTTSSSS



GGGTTT
S

Template Predicted Secondary structure 


























Template SS confidence 















































































   17..20.........30.........40.........50.........60.........70.........80.........90......
 
   473.. ....480.........490.........
Predicted Secondary structure 

...............




Query SS confidence 


. . . . . . . . . . . . . . .























Query Sequence  NEP. . . . . . . . . . . . . . . EDTMKLVEICQQHFPHLHILARAR
Query Conservation   
 ...............          
       




 
Alig confidence 


...............























Template Conservation        
         
      
   
    
   

  

Template Sequence  GANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATN
Template Known Secondary structure  S



TTT
SGGGT

S
SS
Template Predicted Secondary structure 













Template SS confidence 









































   97..100.........110.........120.........130........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions