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Job DescriptionP45522
Confidence94.63%DateThu Jan 5 12:02:52 GMT 2012
Rank418Aligned Residues181
% Identity9%Templated1bgva1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Aminoacid dehydrogenase-like, C-terminal domain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   397..400.........410.........420.........430.........440.........450.........460...
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Query Sequence  NDDKPQVIVVGFGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQVDLLRSAGAE. . . . . . . . . . . . .
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Template Sequence  TLVGKTVALAGFGNVAWGAAKKLAELGAKAVTL. . . . . . . . . . SGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYA
Template Known Secondary structure 
STT


SST
..........TT
TT
S
S



T
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   227..230.........240.........250......... 260.........270.........280.........290......
 
   464.....470.........480.........490.........500. ........510.........520..
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Query Sequence  . . . . . . . . . . . . . . . . AAESIVITCNEPEDTMKLVEICQQHFPHLHILARARGR. . . . . VEAHELLQAGVTQFSRETFSS
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Template Sequence  DKFGVQFFPGEKPWGQKVDIIMPCATQNDVDLEQAKKIVA. . NNVKYYIEVANMPTTNEALRFLMQQPNM. VVAPSKAVN
Template Known Secondary structure  T
T

GGGS

S

S
TT
B
..TT



SSS
B

TT
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T
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   297..300.........310.........320.........330...... ...340.........350.........360.... .....370...
 
   523......530.. .......540.........550.........560.........570.........580.........590......
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Query Sequence  ALELGRKTLV. . . . . . TLGMHPHQAQRAQLHFRRLDMRMLRELIPMHADTVQISRAREARRELEEIFQREMQQERRQLDG
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Template Sequence  AGGVLVSGFEMSQNSERLSWTAEEVDSKLHQVMTDIHDGSAAAAERYGLGY. . . . . . . NLVAGANIVGFQKIADAMMAQG
Template Known Secondary structure  TTS


TT

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   374.....380.........390.........400.........410.........420.... .....430.........440......
 
   597
Predicted Secondary structure 
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Query Sequence  W
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Template Conservation   
Template Sequence  I
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 
   447
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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