Return to main results Retrieve Phyre Job Id

Job DescriptionP45522
Confidence97.38%DateThu Jan 5 12:02:52 GMT 2012
Rank64Aligned Residues93
% Identity12%Templatec3ojlA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:cap5o; PDBTitle: native structure of the udp-n-acetyl-mannosamine dehydrogenase cap5o2 from staphylococcus aureus
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   402.......410.........420.........430.........440.........450.........460 .........470.
Predicted Secondary structure 



















..........


Query SS confidence 


























































. . . . . . . . . .










Query Sequence  QVIVVGFGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQVDLLRSA. . . . . . . . . . GAEAAESIVIT
Query Conservation   


 
 
  
  

  
         

 
   
      
     

      
  
..........

  
   
  
Alig confidence 












































..











..........










Template Conservation 

 




 

   
  

  
  
   
    

  
  
  

.. 
 

   
        
  
     





 
Template Sequence  KLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISI. . EEPGLQEVYEEVLSSGKLKVSTTPEASDVFIIA
Template Known Secondary structure 

STTTT

S
TT

SS..

TTTTSSS



S
Template Predicted Secondary structure 













..














Template SS confidence 















































































   2.......10.........20.........30.........40...... ...50.........60.........70.........
 
   472. ......480.........490......
Predicted Secondary structure 

...........




Query SS confidence 

. . . . . . . . . . .






















Query Sequence  CN. . . . . . . . . . . EPEDTMKLVEICQQHFPHLHILA
Query Conservation    ...........
           
       


Alig confidence 

...........






















Template Conservation 
 

   
     

  
      
   
  
 


Template Sequence  VPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTII
Template Known Secondary structure 



B
SSTT

B

GGG

TT
Template Predicted Secondary structure 


















Template SS confidence 



































   80.........90.........100.........110.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions