Job Description P45522 Confidence 94.17% Date Thu Jan 5 12:02:52 GMT 2012 Rank 455 Aligned Residues 94 % Identity 14% Template c3nhzA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440					.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.		.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.																																		.
Query SS confidence																					.	.	.	.																																		.
Query Sequence		N	K	M	R	I	T	V	L	E	R	D	I	S	A	V	N	L	M	R	.	.	.	.	K	Y	G	Y	K	V	Y	Y	G	D	A	T	Q	V	D	L	L	R	S	A	G	A	E	A	A	E	S	I	V	I	T	C	N	.	E	P	E	D	T	M	K	L	V	E	I	C	Q	Q	H	F	P	H	L	H	I	L	A
Query Conservation																					.	.	.	.																																		.
Alig confidence																					.	.	.	.										.																								.															.
Template Conservation																																		.																																							.
Template Sequence		M	R	Q	R	I	L	V	V	D	D	D	A	S	L	A	E	M	L	T	I	V	L	R	G	E	G	F	D	T	A	V	I	.	G	D	G	T	Q	A	L	T	A	V	R	E	L	R	P	D	L	V	L	L	D	L	M	L	P	G	M	N	G	I	D	V	C	R	V	L	R	A	.	D	S	G	V	P	I	V	M
Template Known Secondary structure											S															T	T							.			G	G	G											S						S	S		S	S	S												.
Template Predicted Secondary structure																																		.																																							.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.
		497	.			.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		R	A	.	.	R	G	R	V	E	A	H	E	L	L	Q	A	G	V	T	Q	F	S	R
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		L	T	A	K	T	D	T	V	D	V	V	L	G	L	E	S	G	A	D	D	Y	I	M
Template Known Secondary structure					T	T		S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions