Job Description P45522 Confidence 95.62% Date Thu Jan 5 12:02:52 GMT 2012 Rank 299 Aligned Residues 137 % Identity 10% Template c3fi9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of malate dehydrogenase from porphyromonas2 gingivalis Resolution 1.90 Å

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		399	400	.	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.			.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.								.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure											.																		.	.																		.	.	.	.	.	.	.
Query SS confidence											.																		.	.																		.	.	.	.	.	.	.
Query Sequence		D	K	P	Q	V	I	V	V	G	.	F	G	R	F	G	Q	V	I	G	R	L	L	M	A	N	K	M	.	.	R	I	T	V	L	E	R	D	I	S	A	V	N	L	M	R	K	.	.	.	.	.	.	.	Y	G	Y	K	V	Y	Y	G	D	A	T	Q	V	D	L	L	R	S	A	G	A	E	A	A	E	S	I
Query Conservation											.																		.	.																		.	.	.	.	.	.	.
Alig confidence											.																		.	.																		.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.
Template Sequence		T	E	E	K	L	T	I	V	G	A	A	G	M	I	G	S	N	M	A	Q	T	A	A	M	M	R	L	T	P	N	L	C	L	Y	D	P	F	A	V	G	L	E	G	V	A	E	E	I	R	H	C	G	F	E	G	L	N	L	T	F	T	S	D	I	K	E	A	.	.	.	.	.	.	L	T	D	A	K	Y	I
Template Known Secondary structure			S	S						S	T	T	S													T	T			S							S																		T	T							S						.	.	.	.	.	.		T	T
Template Predicted Secondary structure																																																																					.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.							.	.	.	.	.	.	.
		469	470	.	.	.	.					.	.	.	.	.	480	.	.					.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.						.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure								.	.	.	.									.	.	.	.																				.	.	.	.	.
Query SS confidence								.	.	.	.									.	.	.	.																				.	.	.	.	.
Query Sequence		V	I	T	C	N	E	.	.	.	.	P	E	D	T	M	K	L	V	.	.	.	.	E	I	C	Q	Q	H	F	P	H	L	H	I	L	A	R	A	R	G	R	.	.	.	.	.	V	E	A	H	E	L	L	Q	A	G	V	T	Q	F	S	R	E	T	F	S	S	A	L	E	L	G	R	K	T	L	V	T	L	G
Query Conservation								.	.	.	.									.	.	.	.																				.	.	.	.	.
Alig confidence								.	.	.	.									.	.	.	.																				.	.	.	.	.
Template Conservation
Template Sequence		V	S	S	G	G	T	R	E	D	L	L	K	G	N	A	E	I	A	A	Q	L	G	K	D	I	K	S	Y	C	P	D	C	K	H	V	I	I	I	F	N	P	A	D	I	T	G	L	V	T	L	I	Y	S	G	L	K	P	S	Q	V	T	T	L	A	G	L	D	S	T	R	L	Q	S	E	L	A	K	H	F	G
Template Known Secondary structure																															T	T								S	S	S													T			G	G	G																					T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		536	.	.	.	540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	H	P	H	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	Q	S	L	V
Template Known Secondary structure		S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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