 |
Job Description | P45522 | Confidence | 96.49% | Date | Thu Jan 5 12:02:52 GMT 2012 |
Rank | 187 | Aligned Residues | 104 |
% Identity | 16% | Template | c3e9mC_ |
PDB info |
PDB header:oxidoreductase | Chain: C: PDB Molecule:oxidoreductase, gfo/idh/moca family; |
PDBTitle: crystal structure of an oxidoreductase from enterococcus2 faecalis
|
Resolution | 2.70 Å |
|
 |
  |   |
399 | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | |
. | . | . | . | . | |
. | . | 430 | . | . | . | . | . | . | . | . | |
. | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  | . |  |  |  |
|
|  |  |  |  |  |  | . |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | K | P | Q | V | I | V | V | G | F | G | R | F | G | Q | V | I | G | R | L | L | M | A | N | . |
K | M | R | I | T | . |
V | L | E | R | D | I | S | A | V | N | L | . |
M | R | K | Y | G | Y | K | V | Y | Y | G | D | A | T | Q | V | D | L | L | R | S | A | G | A | E | A | A | E | S | I | V | I | T | C | N | E | P |
Query Conservation |   |
  |   |   |   |
|
|
|   |
|   |
|   |   |
|   |   |
|
|   |   |
|   |   |   | . |   |   |   |   |   | . |   |
|
|   |
|   |   |   |
|   |   | . |   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |
|
|   |   |   | . | . | . |   |   |
|   |
|   |
|   |
|
|   |   |
Template Sequence |   |
D | K | I | R | Y | G | I | X | S | T | A | Q | I | V | P | R | F | V | A | G | L | R | E | S | A | Q | A | E | V | R | G | I | A | S | R | R | L | E | N | A | Q | K | X | A | K | E | L | A | I | P | V | A | Y | G | S | Y | . |
. |
E | E | L | C | K | D | E | . |
. |
. |
T | I | D | I | I | Y | I | P | T | Y | N | Q |
Template Known Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
| T | T |  |  |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| B |
| S | S |  | . | . |  |  |  |  | T |
| T | . | . | . | T |
| S |  |  |  |  |
|
|
| T | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  | . | . |  |  |  |  |  |
|
| . | . | . |
|
|
|  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
|
. | . | 60 | . | . | . | . | |
|
|
. | . | . | . | . | 70 | . | . | . | . | . | . |
  |
  |   |
476 | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | |
|
|
. | . | 500 | . | . | . | . | . | . | . | . | . | 510 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | D | T | M | K | L | V | E | I | C | Q | Q | H | F | P | H | L | H | I | L | A | R | . |
. |
. |
A | R | G | R | V | E | A | H | E | L | L | Q | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|
| . | . | . |
|   |   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |
|
|   |   | . | . | . |
|
|   |
|   |   |
|
|
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |
Template Sequence |   |
G | H | Y | S | A | A | K | L | A | L | S | Q | . |
. |
. |
G | K | P | V | L | L | E | K | P | F | T | L | N | A | A | E | A | E | E | L | F | A | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | . | . | . | T |
|
|  |  |  |
| S | S |
|
| S | S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | |
|
|
. | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|