Job Description P45522 Confidence 95.14% Date Thu Jan 5 12:02:52 GMT 2012 Rank 344 Aligned Residues 99 % Identity 17% Template c3dl2A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ubiquitin-conjugating enzyme e2 variant 3; PDBTitle: hexagonal structure of the ldh domain of human ubiquitin-2 conjugating enzyme e2-like isoform a Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.			.	.	.	.	.	430	.	.	.	.					.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.											.	.	.	.
Query SS confidence																																	.	.											.	.	.	.
Query Sequence		P	W	V	N	D	D	K	P	Q	V	I	V	V	G	F	G	R	F	G	Q	V	I	G	R	L	L	M	A	N	K	M	.	.	R	I	T	V	L	E	R	D	I	S	.	.	.	.	A	V	N	L	M	R	K	Y	G	Y	K	V	Y	Y	G	D	A	T	Q	V	D	L	L	R	S	A	G	A	E	A	A	E	S
Query Conservation																																	.	.											.	.	.	.
Alig confidence																																	.	.									.		.	.	.	.																.									.	.	.	.	.
Template Conservation																																											.																					.									.	.	.	.	.
Template Sequence		G	S	S	K	S	T	V	N	K	I	T	V	V	G	G	G	E	L	G	I	A	C	T	L	A	I	S	A	K	G	I	A	D	R	L	V	L	L	D	L	S	.	E	G	T	K	G	A	T	M	D	L	E	I	F	N	L	P	N	V	E	I	.	S	K	D	L	S	A	S	A	.	.	.	.	.	H	S	K	V
Template Known Secondary structure																	S														T			S								S	.		G	G	G		T	T							T		T	T				.		S		G	G	G	G	T	.	.	.	.	.	T		S
Template Predicted Secondary structure																																											.																					.									.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.						.	.	240	.
		468	.	470	.	.	.	.	.	.	.	.											.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	I	T	C	N	E	P	E	D	T	.	.	.	.	.	.	.	.	.	.	M	K	L	V	E	I	C	Q	Q	H	F	P	H	L	H	I	L	A	R	A	R
Query Conservation													.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	F	T	V	N	S	Q	S	Y	L	D	V	V	Q	S	N	V	D	M	F	R	A	L	V	P	A	L	G	H	Y	S	Q	H	S	V	L	L	V	A	S	Q
Template Known Secondary structure																								T	T								S	T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions