Job Description P45522 Confidence 96.80% Date Thu Jan 5 12:02:52 GMT 2012 Rank 139 Aligned Residues 136 % Identity 14% Template c3d0oA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-lactate dehydrogenase 1; PDBTitle: crystal structure of lactate dehydrogenase from2 staphylococcus aureus Resolution 1.80 Å

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		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.			.	.	.	.	.	430	.	.	.	.	.	.	.	.									.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.															.	.	.	.	.	.	.	.
Query SS confidence																											.	.															.	.	.	.	.	.	.	.
Query Sequence		K	P	Q	V	I	V	V	G	F	G	R	F	G	Q	V	I	G	R	L	L	M	A	N	K	M	.	.	R	I	T	V	L	E	R	D	I	S	A	V	N	L	.	.	.	.	.	.	.	.	M	R	K	Y	G	Y	K	V	Y	Y	G	D	A	T	Q	V	D	L	L	R	S	A	G	A	E	A	A	E	S	I	V
Query Conservation																											.	.															.	.	.	.	.	.	.	.
Alig confidence																											.	.															.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.
Template Sequence		G	N	K	V	V	L	I	G	N	G	A	V	G	S	S	Y	A	F	S	L	V	N	Q	S	I	V	D	E	L	V	I	I	D	L	D	T	E	K	V	R	G	D	V	M	D	L	K	H	A	T	P	Y	S	P	T	T	V	R	V	K	A	G	E	Y	S	D	C	.	.	.	.	.	.	H	D	A	D	L	V	V
Template Known Secondary structure											S															S		S							S																G	G	G	S	S	S									G	G	G	G	.	.	.	.	.	.	T	T		S
Template Predicted Secondary structure																																																																					.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.							.	.	.	.	.	.	.
		470	.	.	.	.	.																.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.			.	.	510	.				.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.					.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.					.	.	.
Query Sequence		I	T	C	N	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	T	M	K	L	V	E	I	C	Q	Q	H	F	P	H	L	H	I	L	A	R	A	R	G	R	V	E	A	H	E	L	.	.	L	Q	A	G	.	.	.	V	T	Q	F	S	R	E	T	F	S	S	A	L	E	L	G	R	K
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.					.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.					.	.	.
Template Conservation
Template Sequence		I	C	A	G	A	A	Q	K	P	G	E	T	R	L	D	L	V	S	K	N	L	K	I	F	K	S	I	V	G	E	V	M	A	S	K	F	D	G	I	F	L	V	A	T	N	P	V	D	I	L	A	Y	A	T	W	K	F	S	G	L	P	K	E	R	V	I	G	S	G	T	I	L	D	S	A	R	F	R	L	L
Template Known Secondary structure										T	T																								T	T			S						S	S	S																G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	V	T	L	G	M	H	P	H	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	E	A	F	D	V	A	P	R	S	V
Template Known Secondary structure							T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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