Job Description P45522 Confidence 95.98% Date Thu Jan 5 12:02:52 GMT 2012 Rank 258 Aligned Residues 179 % Identity 15% Template c3aoeC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of hetero-hexameric glutamate dehydrogenase from2 thermus thermophilus (leu bound form) Resolution 2.60 Å

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		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430												.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	D	D	K	P	Q	V	I	V	V	G	F	G	R	F	G	Q	V	I	G	R	L	L	M	A	N	K	M	R	I	T	V	L	E	.	.	.	.	.	.	.	.	.	.	.	R	D	I	S	A	V	N	L	M	R	K	Y	G	Y	K	V	Y	Y	G	D	A	T	Q	V	D	L	L	R	S	A	G	A	E	A	A
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Template Conservation																																																																											.	.	.	.
Template Sequence		D	L	R	G	A	R	V	V	V	Q	G	L	G	Q	V	G	A	A	V	A	L	H	A	E	R	L	G	M	R	V	V	A	V	A	T	S	M	G	G	M	Y	A	P	E	G	L	D	V	A	E	V	L	S	A	Y	E	A	T	G	S	L	P	R	L	D	L	A	P	E	E	V	F	G	.	.	.	.	L	E	A
Template Known Secondary structure				T	T									S													T	T									T	T						T	T															S	S		S				B		G	G	G	S	T	T	.	.	.	.	S	S
Template Predicted Secondary structure																																																																											.	.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.					.	.	290
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.					.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.							.	.	530	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.																											.	.	.	.	.	.
Query SS confidence																																						.	.	.	.																											.	.	.	.	.	.
Query Sequence		E	S	I	V	I	T	C	N	E	P	E	D	T	M	K	L	V	E	I	C	Q	Q	H	F	P	H	L	H	I	L	A	R	A	R	G	R	.	.	.	.	V	E	A	H	E	L	L	Q	A	G	V	T	Q	F	S	R	E	T	F	S	S	A	L	E	L	G	.	.	.	.	.	.	R	K	T	L	V	T	L	G
Query Conservation																																						.	.	.	.																											.	.	.	.	.	.
Alig confidence																				.	.	.	.	.														.	.	.	.												.															.	.	.	.	.	.
Template Conservation																				.	.	.	.	.																													.
Template Sequence		E	V	L	V	L	A	A	R	E	G	A	L	D	G	D	R	A	R	.	.	.	.	.	Q	V	Q	A	Q	A	V	V	E	V	A	N	F	G	L	N	P	E	A	E	A	Y	L	L	G	K	G	A	.	L	V	V	P	D	L	L	S	G	G	G	G	L	L	A	S	Y	L	E	W	V	Q	D	L	N	M	F	F
Template Known Secondary structure		S						S	S	S	S		B						T	.	.	.	.	.	T				S						S	T	T		B											T	T		.									T																	T
Template Predicted Secondary structure																				.	.	.	.	.																													.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.						.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	H	P	H	Q	A	Q	R	A	Q	L	H	F	R	R	L	D	M	R	M	L	R	E	L	I	P	M	H	A	D	T	V	Q	I	S	R	A	R	E	A	R	R	E	L	E	E	I	F	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	S	P	E	E	V	R	E	R	F	E	T	R	V	A	R	V	V	D	A	V	C	R	R	A	E	R	G	G	L	D	L	R	M	G	A	L	A	L	A	L	E	R	L	D	E	A	T	R	L
Template Known Secondary structure																														T
Template Predicted Secondary structure
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions