Job Description P45522 Confidence 96.57% Date Thu Jan 5 12:02:52 GMT 2012 Rank 175 Aligned Residues 177 % Identity 13% Template c2yfqA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nad-specific glutamate dehydrogenase; PDBTitle: crystal structure of glutamate dehydrogenase from2 peptoniphilus asaccharolyticus Resolution 2.94 Å

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		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		N	D	D	K	P	Q	V	I	V	V	G	F	G	R	F	G	Q	V	I	G	R	L	L	M	A	N	K	M	R	I	T	V	L	.	E	R	D	I	S	A	V	N	L	M	R	K	Y	G	Y	K	V	Y	Y	G	D	A	T	Q	V	D	L	L	R	S	A	G	A	E	A	A	E	S	I	V	I	T	C	N	E	P
Query Conservation																																			.
Alig confidence																																			.						.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.
Template Sequence		K	M	E	D	A	K	I	A	V	Q	G	F	G	N	V	G	T	F	T	V	K	N	I	E	R	Q	G	G	K	V	C	A	I	A	E	W	D	R	N	.	.	.	.	.	.	E	G	N	Y	A	L	Y	N	E	N	G	I	D	F	K	E	L	L	A	Y	K	E	A	N	K	T	I	I	V	P	A	A	L	E	N
Template Known Secondary structure			G	G	G	S								S													T	T								B			S	S	.	.	.	.	.	.	S		S	B			B		S	S																						S		S	S
Template Predicted Secondary structure																																									.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.							.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500					.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.							.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.																											.	.	.	.	.	.
Query SS confidence																											.	.	.	.																											.	.	.	.	.	.
Query Sequence		E	D	T	M	K	L	V	E	I	C	Q	Q	H	F	P	H	L	H	I	L	A	R	A	R	G	.	.	.	.	R	V	E	A	H	E	L	L	Q	A	G	V	T	Q	F	S	R	E	T	F	S	S	A	L	E	L	.	.	.	.	.	.	G	R	K	T	L	V	T	L	G	M	H	P	H	Q	A	Q	R	A	Q
Query Conservation																											.	.	.	.																											.	.	.	.	.	.
Alig confidence												.	.	.	.	.											.	.	.	.													.														.	.	.	.	.	.
Template Conservation												.	.	.	.	.																											.
Template Sequence		V	I	T	G	E	R	A	K	T	I	.	.	.	.	.	N	A	K	L	V	C	E	A	A	N	G	P	T	T	P	E	G	D	K	V	L	T	E	R	G	I	.	N	L	T	P	D	I	L	T	N	S	G	G	V	L	V	S	Y	Y	E	W	V	Q	N	Q	Y	G	Y	Y	W	T	E	A	E	V	E	E	K	Q
Template Known Secondary structure			S						T	T		.	.	.	.	.			S						S	S	S		S												T		.									T	T																T
Template Predicted Secondary structure												.	.	.	.	.																											.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.						.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		546	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	F	R	R	L	D	M	R	M	L	R	E	L	I	P	M	H	A	D	T	V	Q	I	S	R	A	R	E	A	R	R	E	L	E	E	I	F	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	D	M	M	K	A	I	K	G	V	F	A	V	A	D	E	Y	N	V	T	L	R	E	A	V	Y	M	Y	A	I	K	S	I	D	V	A	M	K	L
Template Known Secondary structure																			T	T
Template Predicted Secondary structure
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions