Job Description P45522 Confidence 96.49% Date Thu Jan 5 12:02:52 GMT 2012 Rank 185 Aligned Residues 139 % Identity 16% Template c2v6bB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:l-lactate dehydrogenase; PDBTitle: crystal structure of lactate dehydrogenase from deinococcus2 radiodurans (apo form) Resolution 2.50 Å

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		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.	.		.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.																.
Query SS confidence																							.	.																.
Query Sequence		V	I	V	V	G	F	G	R	F	G	Q	V	I	G	R	L	L	M	A	N	K	.	.	M	R	I	T	V	L	E	R	D	I	S	A	V	N	L	.	M	R	K	Y	G	Y	K	V	Y	Y	G	D	A	T	Q	V	D	L	L	R	S	A	G	A	E	A	A	E	S	I	V	I	T	C	N	E	P	E	D	T	M
Query Conservation																							.	.																.
Alig confidence																							.	.																.
Template Conservation
Template Sequence		V	G	V	V	G	T	G	F	V	G	S	T	A	A	F	A	L	V	L	R	G	S	C	S	E	L	V	L	V	D	R	D	E	D	R	A	Q	A	E	A	E	D	I	A	H	A	A	P	V	S	H	G	T	R	V	W	H	G	G	H	S	E	L	A	D	A	Q	V	V	I	L	T	A	G	A	E	S	R	L	D
Template Known Secondary structure								S														T			S							S	S													T	T			G	G	G									G	G	G	G	T	T		S
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		480	.	.											.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.			.	.	510	.	.	.	.	.	.	.	.		.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.																										.	.												.
Query SS confidence					.	.	.	.	.	.	.	.	.	.																										.	.												.
Query Sequence		K	L	V	.	.	.	.	.	.	.	.	.	.	E	I	C	Q	Q	H	F	P	H	L	H	I	L	A	R	A	R	G	R	V	E	A	H	E	L	.	.	L	Q	A	G	V	T	Q	F	S	R	E	.	T	F	S	S	A	L	E	L	G	R	K	T	L	V	T	L	G	M	H	P	H	Q	A
Query Conservation					.	.	.	.	.	.	.	.	.	.																										.	.												.
Alig confidence					.	.	.	.	.	.	.	.	.	.																										.	.												.
Template Conservation
Template Sequence		L	L	E	K	N	A	D	I	F	R	E	L	V	P	Q	I	T	R	A	A	P	D	A	V	L	L	V	T	S	N	P	V	D	L	L	T	D	L	A	T	Q	L	A	P	G	Q	P	V	I	G	S	G	T	V	L	D	S	A	R	F	R	H	L	M	A	Q	H	A	G	V	D	G	T	H	A
Template Known Secondary structure																						T	T	S						S	S	S													T	T	S						T	T																T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions