Job Description P45522 Confidence 96.51% Date Thu Jan 5 12:02:52 GMT 2012 Rank 183 Aligned Residues 149 % Identity 11% Template c2v65A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-lactate dehydrogenase a chain; PDBTitle: apo ldh from the psychrophile c. gunnari Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.			.	.	.	.	.	430	.	.	.	.	.	.	.		.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.														.
Query SS confidence																																		.	.														.
Query Sequence		K	P	W	V	N	D	D	K	P	Q	V	I	V	V	G	F	G	R	F	G	Q	V	I	G	R	L	L	M	A	N	K	M	.	.	R	I	T	V	L	E	R	D	I	S	A	V	N	.	L	M	R	K	Y	G	Y	K	V	Y	Y	G	D	A	T	Q	V	D	L	L	R	S	A	G	A	E	A	A	E	S	I	V
Query Conservation																																		.	.														.
Alig confidence																																		.	.														.
Template Conservation
Template Sequence		K	E	E	P	V	G	S	R	S	K	V	T	V	V	G	V	G	M	V	G	M	A	S	A	I	S	I	L	L	K	D	L	C	D	E	L	A	M	V	D	V	M	E	D	K	L	K	G	E	V	M	D	L	Q	H	G	S	L	F	L	K	T	K	I	V	G	D	K	D	Y	S	V	T	A	N	S	K	V	V	V
Template Known Secondary structure			S						S	S								S													T	T			S							S														T	T	G	G	G			S						S	S	G	G	G	G	T	T		S
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		470	.												.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.			.	.	510	.	.			.	.	.	.	.	.		.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.																																					.	.						.	.							.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.																																					.	.						.	.							.
Query Sequence		I	T	.	.	.	.	.	.	.	.	.	.	.	C	N	E	P	E	D	T	M	K	L	V	E	I	C	Q	Q	H	F	P	H	L	H	I	L	A	R	A	R	G	R	V	E	A	H	E	L	.	.	L	Q	A	G	V	.	.	T	Q	F	S	R	E	.	T	F	S	S	A	L	E	L	G	R	K	T	L	V	T
Query Conservation				.	.	.	.	.	.	.	.	.	.	.																																					.	.						.	.							.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.																																					.	.						.	.							.
Template Conservation
Template Sequence		V	T	A	G	A	G	E	S	R	L	N	L	V	Q	R	N	V	N	I	F	K	F	I	I	P	N	I	V	K	Y	S	P	N	C	I	L	M	V	V	S	N	P	V	D	I	L	T	Y	V	A	W	K	L	S	G	F	P	R	H	R	V	I	G	S	G	T	N	L	D	S	A	R	F	R	H	L	I	G	E	K
Template Known Secondary structure																																	T	T							S	S	S											T	T				G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		534	.	.	.	.	.	540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	M	H	P	H	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	L	H	P	S	S	C
Template Known Secondary structure			T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions