Job Description P45522 Confidence 97.07% Date Thu Jan 5 12:02:52 GMT 2012 Rank 102 Aligned Residues 89 % Identity 16% Template c2uyyD_ PDB info PDB header:cytokine Chain: D: PDB Molecule:n-pac protein; PDBTitle: structure of the cytokine-like nuclear factor n-pac Resolution 2.5 Å

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		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	D	K	P	Q	V	I	V	V	G	F	G	R	F	G	Q	V	I	G	R	L	L	M	A	N	K	M	R	I	T	V	L	E	R	D	I	S	A	V	N	L	M	R	K	Y	G	Y	K	V	Y	Y	G	D	A	T	Q	V	D	L	L	R	S	A	G	A	E	A	A	E	S	I	V	I	T	C	N	E	P	E
Query Conservation
Alig confidence																																																					.	.	.	.							.	.	.	.
Template Conservation																																																					.	.	.	.							.	.	.	.
Template Sequence		T	P	T	D	K	K	I	G	F	L	G	L	G	L	M	G	S	G	I	V	S	N	L	L	K	M	G	H	T	V	T	V	W	N	R	T	A	E	K	C	D	L	F	I	Q	E	G	A	R	L	G	.	.	.	.	R	T	P	A	E	V	.	.	.	.	V	S	T	C	D	I	T	F	A	C	V	S	D	P	K
Template Known Secondary structure					S	S								S													T	T								S	S	G	G	G	G						T	T					.	.	.	.	S						.	.	.	.					S							S	S
Template Predicted Secondary structure																																																					.	.	.	.							.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.					.	.	.	.	.	320					.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	M	K	L	V	E	I	C	Q	Q	H	F	P	H	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	K	D	L	V	L	G	P	S	G	V	L	Q	G	I	R
Template Known Secondary structure									S	T	T		G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions