Job Description P45522 Confidence 94.39% Date Thu Jan 5 12:02:52 GMT 2012 Rank 441 Aligned Residues 101 % Identity 18% Template c2q41D_ PDB info PDB header:transferase Chain: D: PDB Molecule:spermidine synthase 1; PDBTitle: ensemble refinement of the protein crystal structure of spermidine2 synthase from arabidopsis thaliana gene at1g23820 Resolution 2.70 Å

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		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.												.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure																													.																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	D	K	P	Q	V	I	V	V	G	F	G	R	F	G	Q	V	I	G	R	L	L	M	A	N	K	M	.	R	I	T	V	L	E	R	D	I	S	A	V	N	L	M	R	K	.	.	.	.	.	.	.	.	.	.	.	Y	G	Y	K	V	Y	Y	G	D	A	T	Q	V	D	L	L	R	S	A	G	A	E	A	A
Query Conservation																													.																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.														.																		.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation															.																																																					.	.
Template Sequence		P	N	P	K	K	V	L	V	I	G	G	G	D	.	G	G	V	L	R	E	V	A	R	H	A	S	I	E	Q	I	D	X	C	E	I	D	K	X	V	V	D	V	S	K	Q	F	F	P	D	V	A	I	G	Y	E	D	P	R	V	N	L	V	I	G	D	G	.	.	V	A	F	L	K	N	A	A	E	G	S	Y
Template Known Secondary structure		S	S								S		S	S	.	S							T	T		T	T																						T	T	T	G	G	G	T	T		T	T						S			.	.						S	S		S	S
Template Predicted Secondary structure															.																																																					.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.			.	.	.	.	.	.	190	.	.	.	.	.
		466	.	.	.	470	.	.	.	.	.	.	.								.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure														.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.
Query Sequence		E	S	I	V	I	T	C	N	E	P	E	D	.	.	.	.	.	.	.	T	M	K	L	V	E	I	C	Q	Q	H	F	P	H	L	H	I	L	A	R	A	R	G	R
Query Conservation														.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	V	I	V	D	S	S	D	P	I	G	P	A	K	E	L	F	E	K	P	F	F	Q	S	V	A	R	A	L	R	P	G	G	V	V	C	T	Q	A	E	S	L
Template Known Secondary structure											S	S	S	G	G	G	G	G	G	S																								T
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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