Job Description P45522 Confidence 97.09% Date Thu Jan 5 12:02:52 GMT 2012 Rank 101 Aligned Residues 138 % Identity 15% Template c2hjrK_ PDB info PDB header:oxidoreductase Chain: K: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of cryptosporidium parvum malate2 dehydrogenase Resolution 2.20 Å

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		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.									.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.														.	.	.	.	.	.	.	.
Query SS confidence																												.														.	.	.	.	.	.	.	.
Query Sequence		D	K	P	Q	V	I	V	V	G	F	G	R	F	G	Q	V	I	G	R	L	L	M	A	N	K	M	.	R	I	T	V	L	E	R	D	I	S	A	V	N	.	.	.	.	.	.	.	.	L	M	R	K	Y	G	Y	K	V	Y	Y	G	D	A	T	Q	V	D	L	L	R	S	A	G	A	E	A	A	E	S	I	V
Query Conservation																												.														.	.	.	.	.	.	.	.
Alig confidence																												.														.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.
Template Sequence		M	R	K	K	I	S	I	I	G	A	G	Q	I	G	S	T	I	A	L	L	L	G	Q	K	D	L	G	D	V	Y	M	F	D	I	I	E	G	V	P	Q	G	K	A	L	D	L	N	H	C	M	A	L	I	G	S	P	A	K	I	F	G	E	N	N	Y	E	Y	L	Q	.	.	.	.	.	N	S	D	V	V	I
Template Known Secondary structure												S													T	T		S							S	S	T	T																	T									S		G	G	G	G	T	.	.	.	.	.	T		S
Template Predicted Secondary structure																																																																							.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.						.	.	.	.	.	.
		470	.	.	.	.	.	.	.	.																.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.			.	.	510	.	.				.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.						.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.						.	.	.
Query Sequence		I	T	C	N	E	P	E	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	K	L	V	E	I	C	Q	Q	H	F	P	H	L	H	I	L	A	R	A	R	G	R	V	E	A	H	E	L	.	.	L	Q	A	G	V	.	.	.	T	Q	F	S	R	E	T	F	S	S	A	L	E	L	G	R	K
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.						.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.						.	.	.
Template Conservation
Template Sequence		I	T	A	G	V	P	R	K	P	N	M	T	R	S	D	L	L	T	V	N	A	K	I	V	G	S	V	A	E	N	V	G	K	Y	C	P	N	A	F	V	I	C	I	T	N	P	L	D	A	M	V	Y	Y	F	K	E	K	S	G	I	P	A	N	K	V	C	G	M	S	G	V	L	D	S	A	R	F	R	C	N
Template Known Secondary structure					S					T	T			S	G	G	G																				T	T	S							S	S																G	G	G
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	V	T	L	G	M	H	P	H	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	R	A	L	G	V	K	P	S	D	V
Template Known Secondary structure							T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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