Job Description P45522 Confidence 95.71% Date Thu Jan 5 12:02:52 GMT 2012 Rank 285 Aligned Residues 137 % Identity 13% Template c2fnzA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:lactate dehydrogenase; PDBTitle: crystal structure of the lactate dehydrogenase from cryptosporidium2 parvum complexed with cofactor (b-nicotinamide adenine dinucleotide)3 and inhibitor (oxamic acid) Resolution 2.50 Å

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		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.		.	.	.	.	.	430	.	.	.	.	.	.	.	.										.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.															.	.	.	.	.	.	.	.	.
Query SS confidence																												.															.	.	.	.	.	.	.	.	.
Query Sequence		D	K	P	Q	V	I	V	V	G	F	G	R	F	G	Q	V	I	G	R	L	L	M	A	N	K	M	.	R	I	T	V	L	E	R	D	I	S	A	V	N	L	.	.	.	.	.	.	.	.	.	M	R	K	Y	G	Y	K	V	Y	Y	G	D	A	T	Q	V	D	L	L	R	S	A	G	A	E	A	A	E	S	I
Query Conservation																												.															.	.	.	.	.	.	.	.	.
Alig confidence																												.															.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.
Template Sequence		E	R	R	K	I	A	V	I	G	S	G	Q	I	G	G	N	I	A	Y	I	V	G	K	D	N	L	A	D	V	V	L	F	D	I	A	E	G	I	P	Q	G	K	A	L	D	I	T	H	S	M	V	M	F	G	S	T	S	K	V	I	G	T	N	D	.	.	.	.	.	.	Y	A	D	I	S	G	S	D	V	V
Template Known Secondary structure												S														T		S							S	S	S	S																	T											.	.	.	.	.	.	G	G	G	G	T	T		S
Template Predicted Secondary structure																																																																		.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.							.	.	.	.	.	.	.	90	.	.
		469	470	.	.	.	.	.	.	.																.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.			.	510	.	.			.	.	.	.	.	.		.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.					.	.							.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.					.	.							.
Query Sequence		V	I	T	C	N	E	P	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	M	K	L	V	E	I	C	Q	Q	H	F	P	H	L	H	I	L	A	R	A	R	G	R	V	E	A	H	E	L	L	.	.	Q	A	G	V	.	.	T	Q	F	S	R	E	.	T	F	S	S	A	L	E	L	G	R
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.					.	.							.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.					.	.							.
Template Conservation
Template Sequence		I	I	T	A	S	I	P	G	R	P	K	D	D	R	S	E	L	L	F	G	N	A	R	I	L	D	S	V	A	E	G	V	K	K	Y	C	P	N	A	F	V	I	C	I	T	N	P	L	D	V	M	V	S	H	F	Q	K	V	S	G	L	P	H	N	K	V	C	G	M	A	G	V	L	D	S	S	R	F	R	T
Template Known Secondary structure								S	S			S	S		G	G	G	G																				T	T	S							S	S																G	G	G
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		529	530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	L	V	T	L	G	M	H	P	H	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	A	Q	H	F	G	V	N	A	S	D	V
Template Known Secondary structure								T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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