Return to main results Retrieve Phyre Job Id

Job DescriptionP45522
Confidence94.97%DateThu Jan 5 12:02:52 GMT 2012
Rank367Aligned Residues75
% Identity15%Templatec2eggA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from2 geobacillus kaustophilus
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   397..400.........410.........420.... .....430.........440.........450.........460.........470...
Predicted Secondary structure 











.

















Query SS confidence 



























.
















































Query Sequence  NDDKPQVIVVGFGRFGQVIGRLLMANKM. RITVLERDISAVNLMRKYGYKVYYGDATQVDLLRSAGAEAAESIVITCN
Query Conservation        


 
 
  
  

  
     .    

 
   
      
     

      
  


  
   
    
Alig confidence 



























.

















.















.












Template Conservation      
 











   

   
   
 
 


  

  

  .                .     






 
Template Sequence  TLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVRE. GDERRSAYFSLAEAET. RLAEYDIIINTTS
Template Known Secondary structure 

TT


STTT
S
SS.S
SSS


.TGGG
S
S
Template Predicted Secondary structure 












.






.








Template SS confidence 













































































   138.140.........150.........160.........170.........180.... .....190.........200 .........210...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions