Job Description P45522 Confidence 94.24% Date Thu Jan 5 12:02:52 GMT 2012 Rank 450 Aligned Residues 184 % Identity 10% Template c2bmaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase (nadp+); PDBTitle: the crystal structure of plasmodium falciparum glutamate2 dehydrogenase, a putative target for novel antimalarial3 drugs Resolution 2.7 Å

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		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430												.	.	.	.	.	.	.	.	.	440	.	.																	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	N	D	D	K	P	Q	V	I	V	V	G	F	G	R	F	G	Q	V	I	G	R	L	L	M	A	N	K	M	R	I	T	V	L	E	.	.	.	.	.	.	.	.	.	.	.	R	D	I	S	A	V	N	L	M	R	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	K	V	Y	Y
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	P	V	E	K	Q	T	A	V	V	S	G	S	G	N	V	A	L	Y	C	V	Q	K	L	L	H	L	N	V	K	V	L	T	L	S	D	S	N	G	Y	V	Y	E	P	N	G	F	T	H	E	N	L	E	F	L	I	D	L	K	E	E	K	K	G	R	I	K	E	Y	L	N	H	S	S	T	A	K	Y	F	P
Template Known Secondary structure				G	G	G								S	S													T	T									T	T						S	S															T	T	T	T			G	G	G	G	G	G	T		S	S					S
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.					.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
Predicted Secondary structure																																																				.	.	.	.																							.	.	.	.
Query SS confidence																																																				.	.	.	.																							.	.	.	.
Query Sequence		G	D	A	T	Q	V	D	L	L	R	S	A	G	A	E	A	A	E	S	I	V	I	T	C	N	E	P	E	D	T	M	K	L	V	E	I	C	Q	Q	H	F	P	H	L	H	I	L	A	R	A	.	.	.	.	R	G	R	V	E	A	H	E	L	L	Q	A	G	V	T	Q	F	S	R	E	T	F	.	.	.	.
Query Conservation																																																				.	.	.	.																							.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.																																.	.								.	.	.	.															.								.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.																																.	.																										.
Template Sequence		N	E	.	.	.	.	.	.	.	.	K	P	W	G	V	P	C	T	L	A	F	P	C	A	T	Q	N	D	V	D	L	D	Q	A	K	L	L	Q	K	N	G	.	.	C	I	L	V	G	E	G	A	N	M	P	S	T	V	D	A	I	N	L	F	K	S	N	N	I	.	I	Y	C	P	S	K	A	A	N	A	G
Template Known Secondary structure		S		.	.	.	.	.	.	.	.		T	T	S	S			S						S	S	T	T		B		S									T	T	.	.								S	S	S		B											T	T		.									T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.																																.	.																										.
Template SS confidence
		306	.									.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.			.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.	.	.	370	.	.	.	.
					521	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	S	S	A	L	E	L	G	R	K	T	L	V	T	L	G	M	H	P	H	Q	A	Q	R	A	Q	L	H	F	R	R	L	D	M	R	M	L	R	E	L	I	P	M	H	A	D	T	V	Q	I	S	R	A	R	E	A	R	R	E	L	E	E	I	F	Q	R	E	M	Q	Q	E	R
Query Conservation		.	.	.
Alig confidence		.	.	.											.
Template Conservation															.
Template Sequence		G	V	A	I	S	G	L	E	M	S	Q	N	F	.	Q	F	S	H	W	T	R	E	T	V	D	E	K	L	K	E	I	M	R	N	I	F	I	A	C	S	E	N	A	L	K	Y	T	K	N	K	Y	D	L	Q	A	G	A	N	I	A	G	F	L	K	V	A	E	S	Y	I	E	Q	G	C
Template Known Secondary structure															.	T	T																																S		S	S
Template Predicted Secondary structure															.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.		.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions