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Job DescriptionP45522
Confidence96.76%DateThu Jan 5 12:02:52 GMT 2012
Rank146Aligned Residues133
% Identity13%Templatec1zcjA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:peroxisomal bifunctional enzyme; PDBTitle: crystal structure of 3-hydroxyacyl-coa dehydrogenase
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   371........380.........390.........400.........410.........420.........430.........440..
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Query Sequence  LLMKLVDKWLSRQFNGPEEEDEKPWVNDDKPQVIVVGFGRFGQVIGRLLMANKMRITVLERDISAVNLMRKY. . . . . . . .
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Template Sequence  LQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKE
Template Known Secondary structure  GGGGGGS
B
TT

BTTT








STTT

SS
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   267..270.........280.........290.........300.........310.........320.........330.........340......
 
   443......450.........460.........470... ......480.........490.........500.........
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Query Sequence  . . . . . . . . . . . . GYKVYYGDATQVDLLRSAGAEAAESIVITCN. EPEDTMKLVEICQQHFPHLHILARARGRVEAHELLQ
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Template Sequence  ASRAHQNGQASAKPKLRFSSSTKE. . . . . . . LSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIAS
Template Known Secondary structure  TT






S
GGG.......GTT
S


S
S
TT


SSS
T
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   347..350.........360.........370 .........380.........390.........400.........410.........
 
   510
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Query Sequence  A
Query Conservation   
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Template Conservation   
Template Sequence  S
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 
   420
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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