Job Description P45522 Confidence 93.96% Date Thu Jan 5 12:02:52 GMT 2012 Rank 481 Aligned Residues 134 % Identity 12% Template c1y6jA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: l-lactate dehydrogenase from clostridium thermocellum cth-1135 Resolution 3.01 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.			.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.					.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure																											.	.																			.	.	.	.
Query SS confidence																											.	.																			.	.	.	.
Query Sequence		K	P	Q	V	I	V	V	G	F	G	R	F	G	Q	V	I	G	R	L	L	M	A	N	K	M	.	.	R	I	T	V	L	E	R	D	I	S	A	V	N	L	M	R	K	Y	.	.	.	.	G	Y	K	V	Y	Y	G	D	A	T	Q	V	D	L	L	R	S	A	G	A	E	A	A	E	S	I	V	I	T	C	N
Query Conservation																											.	.																			.	.	.	.
Alig confidence																											.	.																			.	.	.	.												.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.
Template Sequence		R	S	K	V	A	I	I	G	A	G	F	V	G	A	S	A	A	F	T	M	A	L	R	Q	T	A	N	E	L	V	L	I	D	V	F	A	I	G	E	A	M	D	I	N	H	G	L	P	F	M	G	Q	M	S	L	Y	D	Y	S	D	.	.	.	.	.	.	.	.	V	K	D	C	D	V	I	V	V	T	A	G
Template Known Secondary structure											S													T	T		S	S																	T	T	S				T	T							G	G	G	.	.	.	.	.	.	.	.	G	T	T		S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.									.	.	.	70	.	.	.	.	.	.	.	.
		474	.	.	.	.										.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.					.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.		.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.																								.	.	.	.																		.
Query SS confidence							.	.	.	.	.	.	.	.	.																								.	.	.	.																		.
Query Sequence		E	P	E	D	T	.	.	.	.	.	.	.	.	.	M	K	L	V	E	I	C	Q	Q	H	F	P	H	L	H	I	L	A	R	A	R	G	R	.	.	.	.	V	E	A	H	E	L	L	Q	A	G	V	T	Q	F	S	R	E	.	T	F	S	S	A	L	E	L	G	R	K	T	L	V	T	L	G	M	H	P	H
Query Conservation							.	.	.	.	.	.	.	.	.																								.	.	.	.																		.
Alig confidence							.	.	.	.	.	.	.	.	.																								.	.	.	.																		.
Template Conservation
Template Sequence		A	T	R	L	D	L	A	K	K	N	V	M	I	A	K	E	V	T	Q	N	I	M	K	Y	Y	N	H	G	V	I	L	V	V	S	N	P	V	D	I	I	T	Y	M	I	Q	K	W	S	G	L	P	V	G	K	V	I	G	S	G	T	V	L	D	S	I	R	F	R	Y	L	L	S	E	K	L	G	V	D	V	K
Template Known Secondary structure																												S							S	S	S													T			T	T	T					T	T													T	T	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	V
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		170	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions