Job Description P45522 Confidence 94.84% Date Thu Jan 5 12:02:52 GMT 2012 Rank 390 Aligned Residues 183 % Identity 9% Template c1v9lA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: l-glutamate dehydrogenase from pyrobaculum islandicum2 complexed with nad Resolution 2.80 Å

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		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.												.	.	.	.	.	.	.	.	440	.	.											.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Query Sequence		N	D	D	K	P	Q	V	I	V	V	G	F	G	R	F	G	Q	V	I	G	R	L	L	M	A	N	K	M	R	I	T	V	L	E	R	.	.	.	.	.	.	.	.	.	.	.	D	I	S	A	V	N	L	M	R	K	Y	.	.	.	.	.	.	.	.	.	.	G	Y	K	V	Y	Y	G	D	A	T	Q	V	D
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	E	G	K	T	V	A	I	Q	G	M	G	N	V	G	R	W	T	A	Y	W	L	E	K	M	G	A	K	V	I	A	V	S	D	I	N	G	V	A	Y	R	K	E	G	L	N	V	E	L	I	Q	K	N	K	G	L	T	G	P	A	L	V	E	L	F	T	T	K	D	N	A	E	F	V	K	N	P	D	A
Template Known Secondary structure				T	T									S												T	T	T									S	S						T	T				T						T	T	T	S												T	S						S	S	T	T	G
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.					.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
Predicted Secondary structure																																																.	.	.	.																														.
Query SS confidence																																																.	.	.	.																														.
Query Sequence		L	L	R	S	A	G	A	E	A	A	E	S	I	V	I	T	C	N	E	P	E	D	T	M	K	L	V	E	I	C	Q	Q	H	F	P	H	L	H	I	L	A	R	A	R	G	R	.	.	.	.	V	E	A	H	E	L	L	Q	A	G	V	T	Q	F	S	R	E	T	F	S	S	A	L	E	L	G	R	K	T	.
Query Conservation																																																.	.	.	.																														.
Alig confidence					.	.	.	.																								.	.	.	.	.												.	.	.	.												.																		.
Template Conservation					.	.	.	.																								.	.	.	.	.																											.
Template Sequence		I	F	K	.	.	.	.	L	D	V	D	I	F	V	P	A	A	I	E	N	V	I	R	G	D	N	A	G	L	V	.	.	.	.	.	K	A	R	L	V	V	E	G	A	N	G	P	T	T	P	E	A	E	R	I	L	Y	E	R	G	V	.	V	V	V	P	D	I	L	A	N	A	G	G	V	I	M	S	Y	L
Template Known Secondary structure		G	G	G	.	.	.	.				S						S		S	S		B		T	T	T	T	T	T		.	.	.	.	.			S						S	S	S		B										T	T	T		.									S	T
Template Predicted Secondary structure					.	.	.	.																								.	.	.	.	.																											.
Template SS confidence
		287	.	.					290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.						.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.		.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
							531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	L	V	T	L	G	M	H	P	H	Q	A	Q	R	A	Q	L	H	F	R	R	L	D	M	R	M	L	R	E	L	I	P	M	H	A	D	T	V	Q	I	S	R	A	R	E	A	R	R	E	L	E	E	I	F	Q	R	E	M	Q	Q	E	R	R	Q	L	D	G	W
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																																				.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.
Template Sequence		E	W	V	E	N	L	Q	W	Y	I	W	D	E	E	E	T	R	K	R	L	E	N	I	M	V	N	N	V	E	R	V	Y	K	R	W	Q	R	E	K	G	.	.	.	.	.	.	.	.	W	T	M	R	D	A	A	I	V	T	A	L	E	R	I	Y	N	A	M	K	I	R	G	W
Template Known Secondary structure								T	T																												T	T	S	S	S	.	.	.	.	.	.	.	.																						T	T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.									.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions