Job Description P45522 Confidence 96.18% Date Thu Jan 5 12:02:52 GMT 2012 Rank 235 Aligned Residues 137 % Identity 13% Template c1lldA_ PDB info PDB header:oxidoreductase(choh (d)-nad (a)) Chain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: molecular basis of allosteric activation of bacterial l-lactate2 dehydrogenase Resolution 2.00 Å

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		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.			.	.	.	.	.	430	.	.	.	.	.								.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure																											.	.												.	.	.	.	.	.	.
Query SS confidence																											.	.												.	.	.	.	.	.	.
Query Sequence		K	P	Q	V	I	V	V	G	F	G	R	F	G	Q	V	I	G	R	L	L	M	A	N	K	M	.	.	R	I	T	V	L	E	R	D	I	S	A	.	.	.	.	.	.	.	V	N	L	M	R	K	Y	G	Y	K	V	Y	Y	G	D	A	T	Q	V	D	L	L	R	S	A	G	A	E	A	A	E	S	I	V	I
Query Conservation																											.	.												.	.	.	.	.	.	.
Alig confidence																											.	.												.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.
Template Sequence		P	T	K	L	A	V	I	G	A	G	A	V	G	S	T	L	A	F	A	A	A	Q	R	G	I	A	R	E	I	V	L	E	D	I	A	K	E	R	V	E	A	E	V	L	D	M	Q	H	G	S	S	F	Y	P	T	V	S	I	D	G	S	D	D	P	E	I	.	.	.	.	.	C	R	D	A	D	M	V	V	I
Template Known Secondary structure											S													T	T			S							S	S														T	G	G	G	S	T	T							S		G	G	G	.	.	.	.	.	G	T	T		S
Template Predicted Secondary structure																																																																				.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.						.	.	.	.	.	.	.	80	.
		471	.	.	.	.	.	.	.																.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.			500	.	.	.	.	.	.	.	.	.	510	.	.				.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.														.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.														.	.	.
Query Sequence		T	C	N	E	P	E	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	K	L	V	E	I	C	Q	Q	H	F	P	H	L	H	I	L	A	R	A	R	.	.	G	R	V	E	A	H	E	L	L	Q	A	G	V	.	.	.	T	Q	F	S	R	E	T	F	S	S	A	L	E	L	G	R	K	T
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.														.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.														.	.	.
Template Conservation
Template Sequence		T	A	G	P	R	Q	K	P	G	Q	S	R	L	E	L	V	G	A	T	V	N	I	L	K	A	I	M	P	N	L	V	K	V	A	P	N	A	I	Y	M	L	I	T	N	P	V	D	I	A	T	H	V	A	Q	K	L	T	G	L	P	E	N	Q	I	F	G	S	G	T	N	L	D	S	A	R	L	R	F	L	I
Template Known Secondary structure									T	T																										T	T	S							S	S													T			T	T	S					T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		531	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	T	L	G	M	H	P	H	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	Q	T	G	V	N	V	K	N	V
Template Known Secondary structure						T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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