Job Description P45522 Confidence 96.18% Date Thu Jan 5 12:02:52 GMT 2012 Rank 233 Aligned Residues 141 % Identity 9% Template c1hyhA_ PDB info PDB header:oxidoreductase (choh(d)-nad+(a)) Chain: A: PDB Molecule:l-2-hydroxyisocaproate dehydrogenase; PDBTitle: crystal structure of l-2-hydroxyisocaproate dehydrogenase from2 lactobacillus confusus at 2.2 angstroms resolution-an example of3 strong asymmetry between subunits Resolution 2.20 Å

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		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.			.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.			.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure																										.	.																			.	.
Query SS confidence																										.	.																			.	.
Query Sequence		P	Q	V	I	V	V	G	F	G	R	F	G	Q	V	I	G	R	L	L	M	A	N	K	M	.	.	R	I	T	V	L	E	R	D	I	S	A	V	N	L	M	R	K	Y	.	.	G	Y	K	V	Y	Y	G	D	A	T	Q	V	D	L	L	R	S	A	G	A	E	A	A	E	S	I	V	I	T	C	N	E	P	E
Query Conservation																										.	.																			.	.
Alig confidence																										.	.																			.	.
Template Conservation
Template Sequence		R	K	I	G	I	I	G	L	G	N	V	G	A	A	V	A	H	G	L	I	A	Q	G	V	A	D	D	Y	V	F	I	D	A	N	E	A	K	V	K	A	D	Q	I	D	F	Q	D	A	M	A	N	L	E	A	H	G	N	I	V	I	N	D	W	A	A	L	A	D	A	D	V	V	I	S	T	L	G	N	I	K
Template Known Secondary structure										S														T			S							S	S															G	G	G	S	S	S							S		G	G	G	G	T	T		S							S		G	G
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		477													.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.					.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.		.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.																		.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.																		.
Query Sequence		D	.	.	.	.	.	.	.	.	.	.	.	.	T	M	K	L	V	E	I	C	Q	Q	H	F	P	H	L	H	I	L	A	R	A	R	G	R	.	.	.	.	V	E	A	H	E	L	L	Q	A	G	V	T	Q	F	S	R	E	.	T	F	S	S	A	L	E	L	G	R	K	T	L	V	T	L	G	M	H	P	H
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.																		.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.																		.
Template Conservation
Template Sequence		L	Q	Q	F	A	E	L	K	F	T	S	S	M	V	Q	S	V	G	T	N	L	K	E	S	G	F	H	G	V	L	V	V	I	S	N	P	V	D	V	I	T	A	L	F	Q	H	V	T	G	F	P	A	H	K	V	I	G	T	G	T	L	L	D	T	A	R	M	Q	R	A	V	G	E	A	F	D	L	D	P	R
Template Known Secondary structure		G	T			T	T																		T	T			S						S	S	S																G	G	G					T	T																T			G	G
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V
Template Known Secondary structure		G
Template Predicted Secondary structure
Template SS confidence
		189	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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