Job Description P45522 Confidence 96.32% Date Thu Jan 5 12:02:52 GMT 2012 Rank 211 Aligned Residues 130 % Identity 12% Template c1gv1D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:malate dehydrogenase; PDBTitle: structural basis for thermophilic protein stability:2 structures of thermophilic and mesophilic malate3 dehydrogenases Resolution 2.5 Å

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		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.												.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	V	V	G	F	G	R	F	G	Q	V	I	G	R	L	L	M	A	N	K	.	.	M	R	I	T	V	L	E	R	D	I	S	A	V	N	.	.	.	.	.	.	.	.	.	.	.	L	M	R	K	Y	G	Y	K	V	Y	Y	G	D	A	T	Q	V	D	L	L	R	S	A	G	A	E	A	A	E	S	I	V
Query Conservation																							.	.															.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.															.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.
Template Sequence		I	T	V	I	G	A	G	N	V	G	A	T	T	A	F	R	I	A	D	K	K	L	A	R	E	L	V	L	L	D	V	V	E	G	I	P	Q	G	K	G	L	D	M	Y	E	T	G	P	V	G	L	F	D	T	K	I	T	G	S	N	D	Y	A	D	.	.	.	.	.	.	.	.	T	A	D	S	D	I	V	I
Template Known Secondary structure								S													T	T			S							S	S	S	S											T	T					T									S		G	G	G	.	.	.	.	.	.	.	.	S	T	T		S
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.									.	.	.	70	.	.	.	.
		470	.	.	.						.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.						.	.	.	.	.	510	.	.	.	.	.	.	.	.		.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.																																.	.	.	.	.															.
Query SS confidence						.	.	.	.	.																																.	.	.	.	.															.
Query Sequence		I	T	C	N	.	.	.	.	.	E	P	E	D	T	M	K	L	V	E	I	C	Q	Q	H	F	P	H	L	H	I	L	A	R	A	R	G	R	V	E	A	.	.	.	.	.	H	E	L	L	Q	A	G	V	T	Q	F	S	R	E	.	T	F	S	S	A	L	E	L	G	R	K	T	L	V	T	L	G	M	H	P
Query Conservation						.	.	.	.	.																																.	.	.	.	.															.
Alig confidence						.	.	.	.	.																			.													.	.	.	.	.															.
Template Conservation																													.
Template Sequence		I	T	A	G	L	L	L	M	K	N	A	G	I	V	K	E	V	T	D	N	I	M	K	H	S	K	N	.	P	I	I	I	V	V	S	N	P	L	D	I	M	T	H	V	A	W	V	R	S	G	L	P	K	E	R	V	I	G	M	A	G	V	L	D	A	A	R	F	R	S	F	I	A	M	E	L	G	V	S	M
Template Known Secondary structure																								T	T		S	S	.								S	S													T			G	G	G																									G
Template Predicted Secondary structure																													.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		539	540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	D	I
Template Known Secondary structure		G	G	B
Template Predicted Secondary structure
Template SS confidence
		164	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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