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Job DescriptionP45522
Confidence94.74%DateThu Jan 5 12:02:52 GMT 2012
Rank403Aligned Residues105
% Identity17%Templatec1gthD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:dihydropyrimidine dehydrogenase; PDBTitle: dihydropyrimidine dehydrogenase (dpd) from pig, ternary2 complex with nadph and 5-iodouracil
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TPLLMKLVDKWLSRQF. . . . . . . . NGPEEEDEKPWVNDDKPQVIVVGFGRFGQVIGRLLMANKMR. ITVLERDI. . . . . .
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Template Sequence  GSINIGGLQQFASEVFKAMNIPQIRNPCLPSQEKMPEAYSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS
Template Known Secondary structure 



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B

TTS

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   434.....440.........450..... ....460.........470...
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Query Sequence  . . . . . . . . . . . . . . . SAVNLMRKYGYKVYYGDATQVD. . LLRSAGAEAAESIVITCN
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Template Sequence  TSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSENEITLNTLKEEGYKAAFIGIG
Template Known Secondary structure  TS
TTTS
TTT
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BSTTSB
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   228.230.........240.........250.........260.........270.........280....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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