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Job Description | P45522 | Confidence | 94.74% | Date | Thu Jan 5 12:02:52 GMT 2012 |
Rank | 403 | Aligned Residues | 105 |
% Identity | 17% | Template | c1gthD_ |
PDB info |
PDB header:oxidoreductase | Chain: D: PDB Molecule:dihydropyrimidine dehydrogenase; |
PDBTitle: dihydropyrimidine dehydrogenase (dpd) from pig, ternary2 complex with nadph and 5-iodouracil
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Resolution | 2.25 Å |
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369 | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
T | P | L | L | M | K | L | V | D | K | W | L | S | R | Q | F | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | S | I | N | I | G | G | L | Q | Q | F | A | S | E | V | F | K | A | M | N | I | P | Q | I | R | N | P | C | L | P | S | Q | E | K | M | P | E | A | Y | S | A | K | I | A | L | L | G | A | G | P | A | S | I | S | C | A | S | F | L | A | R | L | G | Y | S | D | I | T | I | F | E | K | Q | E | Y | V | G | G | L | S |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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148 | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . |
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434 | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
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S | A | V | N | L | M | R | K | Y | G | Y | K | V | Y | Y | G | D | A | T | Q | V | D | . |
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L | L | R | S | A | G | A | E | A | A | E | S | I | V | I | T | C | N |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | S | E | I | P | Q | F | R | L | P | Y | D | V | V | N | F | E | I | E | L | M | K | D | L | G | V | K | I | I | C | G | K | S | L | S | E | N | E | I | T | L | N | T | L | K | E | E | G | Y | K | A | A | F | I | G | I | G |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
228 | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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