Job Description P45522 Confidence 94.01% Date Thu Jan 5 12:02:52 GMT 2012 Rank 478 Aligned Residues 183 % Identity 9% Template c1bvuF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:protein (glutamate dehydrogenase); PDBTitle: glutamate dehydrogenase from thermococcus litoralis Resolution 2.50 Å

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		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.		420	.	.	.	.	.	.	.	.	.	430												.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure																									.												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	D	D	K	P	Q	V	I	V	V	G	F	G	R	F	G	Q	V	I	G	R	L	L	.	M	A	N	K	M	R	I	T	V	L	E	.	.	.	.	.	.	.	.	.	.	.	R	D	I	S	A	V	N	L	M	R	K	Y	G	Y	K	V	Y	Y	G	D	A	T	Q	V	D	L	L	R	S	A	G	A	E	A
Query Conservation																									.												.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.												.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	K	G	K	T	I	A	I	Q	G	Y	G	N	A	G	Y	Y	M	A	K	I	M	S	E	E	Y	G	M	K	V	V	A	V	S	D	T	K	G	G	I	Y	N	P	D	G	L	N	A	D	E	V	L	A	W	K	K	K	T	G	S	V	K	D	F	P	G	A	T	N	I	T	N	E	E	L	L	E	L	E
Template Known Secondary structure				T	T									S													T	T										T	T						T	T															S	S	S	T	T		T	T	S										T	S
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.					.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.							.	.	530	.	.	.	.
Predicted Secondary structure																																							.	.	.	.																											.	.	.	.	.	.
Query SS confidence																																							.	.	.	.																											.	.	.	.	.	.
Query Sequence		A	E	S	I	V	I	T	C	N	E	P	E	D	T	M	K	L	V	E	I	C	Q	Q	H	F	P	H	L	H	I	L	A	R	A	R	G	R	.	.	.	.	V	E	A	H	E	L	L	Q	A	G	V	T	Q	F	S	R	E	T	F	S	S	A	L	E	L	G	.	.	.	.	.	.	R	K	T	L	V	T	L
Query Conservation																																							.	.	.	.																											.	.	.	.	.	.
Alig confidence																							.	.	.	.	.												.	.	.	.												.															.	.	.	.	.	.
Template Conservation																							.	.	.	.	.																											.
Template Sequence		V	D	V	L	A	P	S	A	I	E	E	V	I	T	K	K	N	A	D	N	I	.	.	.	.	.	K	A	K	I	V	A	E	L	A	N	G	P	T	T	P	E	A	D	E	I	L	Y	E	K	G	I	.	L	I	I	P	D	F	L	C	N	A	G	G	V	T	V	S	Y	F	E	W	V	Q	N	I	T	G	D
Template Known Secondary structure			S						S		S	S		B						T	T		.	.	.	.	.			S						S	S			B											T	T		.									T
Template Predicted Secondary structure																							.	.	.	.	.																											.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.						.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	H	P	H	Q	A	Q	R	A	Q	L	H	F	R	R	L	D	M	R	M	L	R	E	L	I	P	M	H	A	D	T	V	Q	I	S	R	A	R	E	A	R	R	E	L	E	E	I	F	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	W	T	V	E	E	T	R	A	K	L	D	K	K	M	T	K	A	F	W	D	V	Y	N	T	H	K	E	K	N	I	N	M	R	D	A	A	Y	V	V	A	V	S	R	V	Y	Q	A	M	K	D
Template Known Secondary structure																															T
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions