Job Description P42630 Confidence 5.71% Date Thu Jan 5 12:01:59 GMT 2012 Rank 92 Aligned Residues 134 % Identity 18% Template c3ugsB_ PDB info PDB header:transferase Chain: B: PDB Molecule:undecaprenyl pyrophosphate synthase; PDBTitle: crystal structure of a probable undecaprenyl diphosphate synthase2 (upps) from campylobacter jejuni Resolution 2.46 Å

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		E	T	S	V	P	Y	D	F	H	S	A	G	E	L	L	K	M	C	D	Y	N	G	L	S	I	.	S	G	L	M	M	H	N	E	L	A	L	R	S	K	A	E	I	D	A	G	F	A	R	I	W	Q	V	M	H	D	G	I	E	R	G	M	N	T	E	G	V	L	P	G	P	L	N	V	P	R	R	A	V	A
Query Conservation																											.
Alig confidence																											.																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	N	R	S	Q	G	V	K	T	M	Q	K	L	M	E	V	C	M	E	E	N	I	S	N	L	S	L	F	A	F	S	T	E	N	W	K	R	P	K	D	E	I	D	F	I	F	E	L	L	D	R	C	L	D	E	A	L	E	K	F	E	K	N	N	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																						T	T											S	G	G	G	G	S																							S	T	T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	R	Q	L	V	S	S	D	N	I	S	N	D	P	M	N	V	I	D	W	I	N	M	Y	A	L	A	V	S	E	E	N	A	A	G	G	R	V	V	T	A	P	T	N	G	A	C	G	I	I	P	A	V	L	A	Y	Y	D	K	F	R	R	P	V	N	E	R	S	I	A	R	Y	F
Query Conservation
Alig confidence		.	.	.	.													.																																							.
Template Conservation		.	.	.	.													.																																							.
Template Sequence		.	.	.	.	L	R	A	I	G	D	L	S	R	L	E	D	.	K	V	R	E	K	I	T	L	V	E	E	K	T	K	H	C	D	A	L	C	V	N	L	A	I	S	Y	G	A	R	D	E	I	I	R	A	A	K	.	R	V	I	E	K	K	L	E	L	N	E	E	N	L	T	Q	N	L
Template Known Secondary structure		.	.	.	.					S		G	G	G	S			.														T	T			S																					.					T	T				S							T	S
Template Predicted Secondary structure		.	.	.	.													.																																							.
Template SS confidence
						94	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions