Return to main results Retrieve Phyre Job Id

Job DescriptionP42630
Confidence6.13%DateThu Jan 5 12:01:59 GMT 2012
Rank83Aligned Residues15
% Identity20%Templatec2f5xC_
PDB info PDB header:transport proteinChain: C: PDB Molecule:bugd; PDBTitle: structure of periplasmic binding protein bugd
Resolution1.72 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   170.........180....
Predicted Secondary structure 




Query SS confidence 














Query Sequence  DFHSAGELLKMCDYN
Query Conservation 

 
  

       
Alig confidence 














Template Conservation 
  
   

  

  
Template Sequence  PPNNIKELAEYVKKN
Template Known Secondary structure  S

S
Template Predicted Secondary structure 




Template SS confidence 














   110.........120....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions