Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF93
Confidence100.00%DateThu Jan 5 11:25:37 GMT 2012
Rank3Aligned Residues125
% Identity46%Templated1onia_
SCOP infoBacillus chorismate mutase-like YjgF-like YjgF/L-PSP
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40 .........50.........60.........70.........
Predicted Secondary structure 
























.









Query SS confidence 







































.






































Query Sequence  MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTG. EVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVK
Query Conservation 
   
     
   
 

 

  
  
 



   
    .        
    
 

   
  

     
     

 
Alig confidence 







































.






































Template Conservation   
  
     
   
 

 

  
  





   
         
   
    
 

   
  

    


   


 
Template Sequence  IRRVISTAKAPGAIGPYSQAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGEILKAAGCDFTNVVKTTVLLA
Template Known Secondary structure 


TTS



SS

STT
SB
TTT
SB
SSSTT

GGGS
Template Predicted Secondary structure 






























Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   80.........90.........100.........110.........120........
Predicted Secondary structure 















Query SS confidence 
















































Query Sequence  DLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAIAVRR
Query Conservation                         



 
 
  
     



 

 
 
Alig confidence 















...





























Template Conservation            
    
...    

 
 
 
  
    




 

   
Template Sequence  DINDFNTVNEIYKQYF. . . KSNFPARAAYQVAALPKGSRIEIEAVAIQG
Template Known Secondary structure 
GGGS...
SS


S

GGG
S
S
Template Predicted Secondary structure 

...













Template SS confidence 
















































   85....90.........100 .........110.........120.........130
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions