Job Description P0AF93 Confidence 100.00% Date Thu Jan 5 11:25:37 GMT 2012 Rank 18 Aligned Residues 125 % Identity 25% Template c3lmeE_ PDB info PDB header:translation Chain: E: PDB Molecule:possible translation initiation inhibitor; PDBTitle: structure of probable translation initiation inhibitor from2 (rpa2473) from rhodopseudomonas palustris Resolution 2.74 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	K	T	I	A	T	E	N	A	P	A	A	I	G	P	Y	V	Q	G	V	D	L	G	N	M	I	I	T	S	G	Q	I	P	V	N	P	K	T	G	E	V	P	A	D	V	A	A	Q	A	R	Q	S	L	D	N	V	K	A	I	V	E	A	A	G	L	K	V	G	D	I	V	K	T	T	V	F	V	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	I	I	A	P	T	D	K	T	I	T	P	S	G	T	W	S	I	G	A	R	A	G	D	F	V	F	I	G	G	M	H	G	T	D	R	V	T	G	K	M	V	D	G	D	E	A	R	I	R	R	M	F	D	N	M	L	A	A	A	E	A	A	G	A	T	K	A	D	A	V	R	L	T	V	F	V	T	D
Template Known Secondary structure									T	T	S					S	S			S					T	T									S	B		T	T	T			B		S	S																			T	T			G	G	G									S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		81	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		L	N	D	F	.	A	T	V	N	A	T	Y	E	A	F	F	T	E	H	N	A	T	F	P	A	R	S	C	V	E	V	A	R	L	P	K	D	V	K	I	E	I	E	A	I	A	V	R
Query Conservation						.
Alig confidence						.												.	.
Template Conservation																		.	.
Template Sequence		V	A	K	Y	R	P	V	V	N	K	V	Q	K	D	I	W	.	.	G	D	G	P	Y	P	P	R	T	V	L	Q	V	P	A	L	D	Q	G	D	I	A	E	I	D	G	T	F	Y	A
Template Known Secondary structure																		.	.	S	S												S			G	G	G		S
Template Predicted Secondary structure																		.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions