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Job DescriptionP0AF93
Confidence100.00%DateThu Jan 5 11:25:37 GMT 2012
Rank8Aligned Residues122
% Identity42%Templatec3k0tA_
PDB info PDB header:sugar binding proteinChain: A: PDB Molecule:endoribonuclease l-psp, putative; PDBTitle: crystal structure of pspto -psp protein in complex with d-beta-glucose2 from pseudomonas syringae pv. tomato str. dc3000
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDL
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Template Sequence  KTVITSDKAPAAIGPYSQAIKAGNTVYXSGQIPLDPSTXELVEGIEAQITQVFENLKSVAQAAGGSFKDIVKLNIFLTDL
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   82.......90.........100.........110.........120......
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Query Sequence  NDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAIAV
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Template Sequence  GHFAKVNEIXGSYF. . . SQPYPARAAIGVAALPRGAQVEXDAILV
Template Known Secondary structure  GGTTT
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   83......90...... ...100.........110.........120....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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