 |
Job Description | P0AF93 | Confidence | 2.73% | Date | Thu Jan 5 11:25:37 GMT 2012 |
Rank | 72 | Aligned Residues | 120 |
% Identity | 16% | Template | c3a16C_ |
PDB info |
PDB header:lyase | Chain: C: PDB Molecule:aldoxime dehydratase; |
PDBTitle: crystal structure of aldoxime dehydratase (oxdre) in complex2 with propionaldoxime
|
Resolution | 1.60 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
|
. | . | . | . | . | . | |
30 | . | . | . | . | . | . | . | . | . | 40 | |
|
|
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  | . | . |
|
|  |  |  |  | . |
|
|  |  |  |  |
|
|
|
|
| . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
M | S | K | T | I | A | T | E | N | A | P | A | A | I | G | P | Y | V | Q | G | V | D | L | . |
. |
G | N | M | I | I | T | . |
S | G | Q | I | P | V | N | P | K | T | G | . |
. |
. |
E | V | P | A | D | V | A | A | Q | A | R | Q | S | L | D | N | V | K | A | I | V | E | A | A | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |
|
|   |
|
|   |   | . | . |
|   |   |
|   |
| . |
|
|
|   |   |   |
|   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|   |   |   |
|   |   |
|
| . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|
|
|
|
|   |
|
|
|
|
|
|
|
|   |   |   |   |   |
|
|   |   |
|   |
|   |   |
|
|   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   |   |
Template Sequence |   |
M | Q | A | S | G | E | L | R | V | I | A | G | D | P | A | V | G | G | R | V | V | V | R | G | H | D | N | I | A | L | I | R | S | G | Q | D | W | A | D | A | E | A | D | E | R | S | L | Y | L | D | E | I | L | P | T | L | Q | S | G | M | D | F | L | R | D | N | G | P | A | V | G | C | Y | S | N | R | F | V | R | N |
Template Known Secondary structure |   |
|
|
| B | S |
|
|  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |
|
| B | T |  |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  | T |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
187 | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | |
. | . | . | . | . | 120 |
Predicted Secondary structure |   |
. | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
| . |
|
|
|  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
L | K | V | G | D | I | V | K | T | T | V | F | V | K | D | L | N | D | F | . |
. |
. |
. |
. |
. |
. |
A | T | V | N | A | T | Y | E | A | F | F | T | E | H | N | A | T | F | P | A | R | S | C | V | E | V | A | R | L | P | . |
K | D | V | K | I | E |
Query Conservation |   |
. | . | . | . |   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |
|   |   |
|   | . |   |   |   |   |
|
|
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |   |   |   |   |
|   |   |
|   |
|
|   |
|
|   |   |
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |   |   |
|
|   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|   |
|
|
|   |   |
|   |   |
|
|
Template Sequence |   |
I | D | I | D | G | N | F | L | D | L | S | Y | N | I | G | H | W | A | S | L | D | Q | L | E | R | W | S | E | S | H | P | T | H | L | R | I | F | T | T | F | F | R | V | A | A | G | L | S | K | L | R | L | Y | H | E | V | S | V | F | D | A | A | D | Q | L | Y | E |
Template Known Secondary structure |   |
 |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
| S | S |
|  |  |  |  |  |  |  |  |  |
| G | G | G |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
267 | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|