Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF93
Confidence100.00%DateThu Jan 5 11:25:37 GMT 2012
Rank22Aligned Residues125
% Identity31%Templatec2ig8C_
PDB info PDB header:structural genomics, unknown functionChain: C: PDB Molecule:hypothetical protein pa3499; PDBTitle: crystal structure of a protein of unknown function pa3499 from2 pseudomonas aeruginosa
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10. ........20.........30.........40.... .....50.........60.........70.....
Predicted Secondary structure 







.




















....




Query SS confidence 










.
































. . . .






























Query Sequence  MSKTIATENAP. AAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPA. . . . DVAAQARQSLDNVKAIVEAAGLKVGDIVKTT
Query Conservation 
   
     
.   
 

 

  
  
 



   
        ....    
    
 

   
  

     
    
Alig confidence 










.
































....






























Template Conservation      
    

  
   

 

  
  
 


       
         
   
    
 

   
 


    


   
Template Sequence  AVRRIRAAALPDLPDASWSNALLVGEELVMSGMTAHPATRQAAERGAALDAHAQALVVLGKVKALLEAAGGHVGNLYKLN
Template Known Secondary structure 



TTS


TT

S
STT

B

TTTT



TT

GGG
Template Predicted Secondary structure 





































Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   76...80.........90.........100.........110.... .....120......
Predicted Secondary structure 












.


Query SS confidence 






































.











Query Sequence  VFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLP. KDVKIEIEAIAV
Query Conservation   

                        



 
 
  
 .    



 

 
Alig confidence 





















.















.











Template Conservation 


           
       .    



 
 
  
     




  

Template Sequence  VYVTRIADKDAIGRARQEFFAG. QGTFPASTLVEVSGLVFPELLVEIDAWAR
Template Known Secondary structure  S
GGGTTT.
S



S

SSTT
S
Template Predicted Secondary structure 




.













Template SS confidence 



















































   83......90.........100.... .....110.........120.........130...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions