Job Description P0AF93 Confidence 100.00% Date Thu Jan 5 11:25:37 GMT 2012 Rank 13 Aligned Residues 122 % Identity 51% Template c1xrgB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative translation initiation inhibitor, yjgf PDBTitle: conserved hypothetical protein from clostridium2 thermocellum cth-2968 Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		K	T	I	A	T	E	N	A	P	A	A	I	G	P	Y	V	Q	G	V	D	L	G	N	M	I	I	T	S	G	Q	I	P	V	N	P	K	T	.	G	E	V	P	A	D	V	A	A	Q	A	R	Q	S	L	D	N	V	K	A	I	V	E	A	A	G	L	K	V	G	D	I	V	K	T	T	V	F	V	K	D	L
Query Conservation																																							.
Alig confidence																																							.
Template Conservation
Template Sequence		E	V	V	K	T	N	K	A	P	E	A	I	G	P	Y	S	Q	A	I	V	T	G	S	F	V	Y	T	S	G	Q	I	P	I	N	P	Q	T	G	E	V	V	D	G	G	I	E	E	Q	A	K	Q	V	L	E	N	L	K	N	V	L	E	A	A	G	S	S	L	N	K	V	V	K	T	T	V	F	I	K	D	X
Template Known Secondary structure							T	T	S					S	S			S					T	T							B			B		T	T	T	S	S	B		S	S																				T	T			G	G	G									S		G
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	F	A	T	V	N	A	T	Y	E	A	F	F	T	E	H	N	A	T	F	P	A	R	S	C	V	E	V	A	R	L	P	K	D	V	K	I	E	I	E	A	I	A	V	R
Query Conservation
Alig confidence																.	.	.
Template Conservation																.	.	.
Template Sequence		D	S	F	A	K	V	N	E	V	Y	A	K	Y	F	.	.	.	S	E	P	Y	P	A	R	S	C	V	E	V	S	K	L	P	K	G	V	L	I	E	I	E	A	V	A	I	K
Template Known Secondary structure		G	G									T	T	T		.	.	.		S	S										S			G	G	G		S
Template Predicted Secondary structure																.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions