 |
Job Description | P0ACW4 | Confidence | 5.98% | Date | Thu Jan 5 11:19:16 GMT 2012 |
Rank | 25 | Aligned Residues | 23 |
% Identity | 26% | Template | c1d2jA_ |
PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:low-density lipoprotein receptor; |
PDBTitle: ldl receptor ligand-binding module 6
|
Resolution | UNK |
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | S | H | C | T | A | G | G | K | F | V | C | N | D | G | S | I | S | A | S | K | K | T | C |
Query Conservation |   |
|
|
|
|   |
|
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   | . |   |   |   |
|   |
|   |   |
|   |
|
|   |   |   |   |   |
|
Template Sequence |   |
V | A | T | C | R | . |
P | D | E | F | Q | C | S | D | G | N | C | I | H | G | S | R | Q | C |
Template Known Secondary structure |   |
|
| S | S |
| . | T | T |
|  |  |  | T | T | T |  |  |  |
| G | G | G | S | S |
Template Predicted Secondary structure |   |
|
|
|
|
| . |
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
212 | . | . | . | . | |
. | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|