Job Description P76540 Confidence 6.08% Date Thu Jan 5 12:24:12 GMT 2012 Rank 67 Aligned Residues 75 % Identity 16% Template c3d5cX_ PDB info PDB header:ribosome Chain: X: PDB Molecule:peptide chain release factor 1; PDBTitle: structural basis for translation termination on the 70s ribosome. this2 file contains the 30s subunit, release factor 1 (rf1), two trna, and3 mrna molecules of the second 70s ribosome. the entire crystal4 structure contains two 70s ribosomes as described in remark 400. Resolution 3.21 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.													.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.																						.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	E	V	D	G	M	V	A	A	I	D	A	A	D	A	M	.	.	.	.	.	.	.	.	.	.	.	.	L	K	A	A	N	V	R	L	L	S	H	E	V	L	D	P	G	.	.	.	R	L	T	L	V	V	E	G	D	L	A	A	C	R	A	A	L	D	A	G	C	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.																						.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	V	E	I	R	A	G	T	G	G	E	E	A	A	L	F	A	R	D	L	F	N	M	Y	L	R	F	A	E	E	M	G	F	E	T	E	V	L	D	S	H	P	T	D	L	G	G	F	S	K	V	V	F	E	V	R	G	P	G	A	Y	G	T	F	K	Y	E	S	G	V	H	R	V	Q	R	V	P	V	T	E
Template Known Secondary structure									S	S																							T												T	T	S	S										S	T	T						G	G	G		S									S	S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	M	R	T	G	R	V	I	S	R	K	E	I	G	R	P	D	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Q	G	R	I	H	T	S	T	A	T	V	A	V	L	P	K	A	E	E
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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