Return to main results Retrieve Phyre Job Id

Job DescriptionP33599
Confidence100.00%DateThu Jan 5 11:52:22 GMT 2012
Rank11Aligned Residues144
% Identity34%Templated2fug51
SCOP infoNqo5-like Nqo5-like Nqo5-like
Resolution3.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60.........70.........80.........90.........100.
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  IGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISI
Query Conservation     
   
                  
           
         
     

              
 
 
 
 
 
Alig confidence 








































..



















...













Template Conservation 

  
 
       

    
 
 
 
  
 
 

   

 .. 

  
  

 

       ...   







 
 
Template Sequence  LERVLEEARAKGYPIEDNGLGNLWVVLPRERFKEEMAHYKA. . MGFNFLADIVGLDYLTYPDP. . . RPERFAVVYELVSL
Template Known Secondary structure  TTT


SSS


STTTTT..TT






TT
SS
...
SSS

Template Predicted Secondary structure 









..










...



Template SS confidence 















































































   3......10.........20.........30.........40... ......50.........60... ......70.......
 
   102 .......110.........120.........130.........140.........150.........160.........170.....
Predicted Secondary structure 
.....















































Query SS confidence 
. . . . .








































































Query Sequence  D. . . . . RNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATE
Query Conservation   .....                   
       
   


  
  

   


              




       
Alig confidence 
.....





















.....













































Template Conservation            
 


 

 
 
 




.....
 
 


  




 
 












  
 







   
Template Sequence  PGWKDGDGSRFFVRVYVPEEDPRLPTVT. . . . . DNFLEREVYDLFGIVFEGHPDLRKILTPEDLEGHPLRKDYPLGETP
Template Known Secondary structure  TTSSS




SS







.....



SS


SS
S



SS
SSS
SSSTTS





Template Predicted Secondary structure 














.....


































Template SS confidence 














































































   78.80.........90.........100..... ....110.........120.........130.........140.........150.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions