Job Description P33599 Confidence 100.00% Date Thu Jan 5 11:52:22 GMT 2012 Rank 1 Aligned Residues 370 % Identity 42% Template d2fug41 SCOP info HydB/Nqo4-like HydB/Nqo4-like Nqo4-like Resolution 3.30

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		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	A	H	G	A	F	R	I	V	L	Q	L	D	G	E	E	I	V	D	C	V	P	D	I	G	Y	H	H	R	G	A	E	K	M	G	E	R	Q	S	W	H	S	Y	I	P	Y	T	D	R	I	E	Y	L	G	G	C	V	N	E	M	P	Y	V	L	A	V	E	K	L	A	G	I	T	V	P	D	R	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	S	T	H	G	V	L	R	L	M	V	T	L	S	G	E	E	V	L	E	V	V	P	H	I	G	Y	L	H	T	G	F	E	K	T	M	E	H	R	T	Y	L	Q	N	I	T	Y	T	P	R	M	D	Y	L	H	S	F	A	H	D	L	A	Y	A	L	A	V	E	K	L	L	G	A	V	V	P	P	R	A	E
Template Known Secondary structure							S	S	S								S	S	S									T	T								G	G	G	S									G	G	G	T	T	S	S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	R	V	M	L	S	E	L	F	R	I	N	S	H	L	L	Y	I	S	T	F	I	Q	D	V	G	A	M	T	P	V	F	F	A	F	T	D	R	Q	K	I	Y	D	L	V	E	A	I	T	G	F	R	M	H	P	A	W	F	R	I	G	G	V	A	H	D	L	P	R	G	W	D	R	L	L	R	E	F	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	R	V	I	L	N	E	L	S	R	L	A	S	H	L	V	F	L	G	T	G	L	L	D	L	G	A	L	T	P	F	F	Y	A	F	R	E	R	E	T	I	L	D	L	F	E	W	V	T	G	Q	R	F	H	H	N	Y	I	R	I	G	G	V	K	E	D	L	P	E	E	F	V	P	E	L	K	K	L	L
Template Known Secondary structure																																																			T	S	S	S	S	S						T	T			S	S				T	T									T
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure
Query SS confidence
Query Sequence		D	W	M	P	K	R	L	A	S	Y	E	K	A	A	L	Q	N	T	I	L	K	G	R	S	Q	G	V	A	A	Y	G	A	K	E	A	L	E	W	G	T	T	G	A	G	L	R	A	T	G	I	D	F	D	V	R	K	A	R	P	Y	S	G	Y	E	N	F	D	F	E	I	P	V	G	G	G	V	S	D	C	Y
Query Conservation
Alig confidence																																																																		.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.
Template Sequence		E	V	L	P	H	R	I	D	E	Y	E	A	L	F	A	E	S	P	I	F	Y	E	R	A	R	G	V	G	V	I	P	P	E	V	A	I	D	L	G	L	T	G	G	S	L	R	A	S	G	V	N	Y	D	V	R	K	A	Y	P	Y	S	G	Y	D	.	.	.	.	.	.	V	P	L	G	E	R	G	D	V	F
Template Known Secondary structure		T	T	T	T	T	T	T								S	S		S			T	T	S		S					S	S	S		S	T	T	T	T	T	T			S	S			S	S			T	T	T	T	T			S	S						.	.	.	.	.	.						S	S	S	S
Template Predicted Secondary structure																																																																		.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.							.	260	.	.	.	.	.	.	.	.
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	V	M	L	K	V	E	E	L	R	Q	S	L	R	I	L	E	Q	C	L	N	N	M	P	E	G	P	F	K	A	D	H	P	L	T	T	P	P	P	K	E	R	T	L	Q	H	I	E	T	L	I	T	H	F	L	Q	V	S	W	G	P	V	M	P	A	N	E	S	F	Q	M	I	E	A	T	K	G	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	R	M	L	V	R	I	R	E	M	R	E	S	V	K	I	I	K	Q	A	L	E	R	L	E	P	G	P	V	R	D	P	N	P	Q	I	T	P	P	P	R	H	L	L	E	T	S	M	E	A	V	I	Y	H	F	K	H	Y	T	E	G	F	H	P	P	K	G	E	V	Y	V	P	T	E	S	A	R	G	E	L
Template Known Secondary structure																								S				S			B				T	T	T	S				T	T		T	T	T		T	T											S						S							B			S	S	S		B
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	Y	L	T	S	D	G	S	T	M	S	Y	R	T	R	V	R	T	P	S	F	A	H	L	Q	Q	I	P	A	A	I	R	G	S	L	V	S	D	L	I	V	Y	L	G	S	I	D	F	V	M	S	D	V	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	Y	I	V	S	D	G	G	S	M	P	Y	R	V	K	V	R	A	P	S	F	V	N	L	Q	S	L	P	Y	A	C	K	G	E	Q	V	P	D	M	V	A	I	I	A	S	L	D	P	V	M	G	D	V	D	R
Template Known Secondary structure									S	S	S	S		S							S					T	T	T					T	T	T	S		G	G	G	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions