Job Description P33599 Confidence 15.88% Date Thu Jan 5 11:52:22 GMT 2012 Rank 30 Aligned Residues 152 % Identity 18% Template c2f3oB_ PDB info PDB header:unknown function Chain: B: PDB Molecule:pyruvate formate-lyase 2; PDBTitle: crystal structure of a glycyl radical enzyme from archaeoglobus2 fulgidus Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.											.	.	.	.	320	.	.	.	.	.										.	.	.	.	330
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Query Sequence		R	I	E	Y	L	G	G	C	V	N	E	M	P	Y	V	L	A	V	E	K	L	A	G	I	T	V	P	D	R	V	N	V	I	R	V	M	L	S	E	L	F	R	I	N	S	H	.	.	.	.	.	.	.	.	.	.	L	L	Y	I	S	T	F	I	Q	D	.	.	.	.	.	.	.	.	.	V	G	A	M	T
Query Conservation																																																.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	V	S	E	A	V	I	N	Y	G	L	R	Y	S	K	L	A	E	E	L	A	E	S	E	D	G	E	R	R	E	E	L	L	K	I	A	E	I	C	R	K	V	P	A	E	K	P	E	T	F	W	E	A	V	Q	F	V	W	L	V	Q	S	A	L	H	Q	E	N	Y	E	Q	A	I	S	M	G	R	I	D
Template Known Secondary structure																								T	T	S																		T	T	T	S				S																			S		S	S						S
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		331	.	.	.	.	.	.	.										.	340	.	.	.	.	.	.	.	.	.	350																			.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.				.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure										.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Query Sequence		P	V	F	F	A	F	T	D	.	.	.	.	.	.	.	.	.	R	Q	K	I	Y	D	L	V	E	A	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	R	M	H	P	A	W	F	R	I	G	G	V	A	H	.	.	.	D	L	P	R	G	W	D	R	L	L	R	E	F	L
Query Conservation										.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation
Template Sequence		Q	Y	L	Y	P	F	F	K	K	D	I	G	E	G	R	I	N	R	E	L	A	F	D	I	L	A	N	L	W	I	K	T	N	E	I	V	P	A	F	D	S	L	L	E	Q	Y	F	S	G	Q	A	T	N	Q	A	V	T	I	G	G	C	D	I	Y	G	N	D	A	T	N	E	L	T	Y	L	M	L	E	V	T
Template Known Secondary structure				S								T	T	T	T	S	S																T	T	S	B												S	T	T	T											B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		381	.	.	.																	.	.	.	.	.	390	.	.	.	.	.	.										.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Query Sequence		D	W	M	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	L	A	S	Y	E	K	A	A	L	Q	.	.	.	.	.	.	.	.	.	N	T	I	L	K	G	R	S	Q	G	V	A	A	Y	G	A	K	E	A	L	E	W	G	T	T	G
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.													.
Template Conservation																																																							.
Template Sequence		D	R	L	R	L	R	Q	P	N	V	H	V	R	I	N	K	G	S	P	E	S	F	L	K	R	L	A	E	A	I	S	S	G	C	N	N	L	A	L	F	F	D	D	A	A	V	K	A	L	K	N	A	E	.	V	D	D	R	D	A	L	N	Y	T	T	D	G
Template Known Secondary structure							S		S								T	T	S														T	T																			T	T	.								T					T
Template Predicted Secondary structure																																																							.
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.		.	.	.	.	.	.	.	420	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions