 |
Job Description | P09549 | Confidence | 18.56% | Date | Thu Jan 5 11:02:24 GMT 2012 |
Rank | 75 | Aligned Residues | 28 |
% Identity | 18% | Template | c3ns5B_ |
PDB info |
PDB header:translation | Chain: B: PDB Molecule:eukaryotic translation initiation factor 3 subunit b; |
PDBTitle: crystal structure of the rna recognition motif of yeast eif3b residues2 76-161
|
Resolution | 2.60 Å |
|
  |   |
191 | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | |
|
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
Query Sequence |   |
D | A | S | K | D | K | L | K | G | S | L | G | E | L | K | Q | L | S | G | L | S | G | . |
. |
V | V | M | G | Y | T | P |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |
| . | . |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|   |   |
|
|   |   |
|
|
| . |   |   |
|
|   |   |
|   |
|   |
|   |   |   |
Template Sequence |   |
C | G | S | M | N | D | A | K | K | I | I | K | S | F | H | G | . |
K | R | L | D | L | K | H | R | L | F | L | Y | T | M |
Template Known Secondary structure |   |
 | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T | . |
| B | S | S | S | S |
| B |
|  |  |  |  |
|
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
131 | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | |
. | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|