Job Description P09549 Confidence 13.49% Date Thu Jan 5 11:02:24 GMT 2012 Rank 100 Aligned Residues 70 % Identity 10% Template c2fy1A_ PDB info PDB header:structural protein/rna Chain: A: PDB Molecule:rna-binding motif protein, y chromosome, family PDBTitle: a dual mode of rna recognition by the rbmy protein Resolution UNK

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		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	L	G	A	L	K	N	A	D	K	V	N	E	I	V	G	K	L	R	G	A	G	Y	R	V	Y	T	S	P	S	T	P	V	Q	G	K	I	T	R	I	L	V	G	P	D	A	S	K	D	K	L	K	G	S	L	G	E	L	K	Q	L	S	G	L	S	G	V	V	M	G
Query Conservation
Alig confidence																																																															.
Template Conservation																																																															.
Template Sequence		L	F	I	G	G	L	N	R	E	T	N	E	K	M	L	K	A	V	F	G	K	H	G	P	I	S	E	V	L	L	I	K	D	R	T	S	K	S	R	G	F	A	F	I	T	F	E	N	P	A	D	A	K	N	A	A	K	D	M	N	G	.	K	S	L	H	G	K	A	I	K
Template Known Secondary structure								T	T	T												T	S	S			S							S	T	T	T	T										S	S												S	S	.		B		S	S	S	B
Template Predicted Secondary structure																																																															.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions