Return to main results Retrieve Phyre Job Id

Job DescriptionP09549
Confidence51.98%DateThu Jan 5 11:02:24 GMT 2012
Rank19Aligned Residues69
% Identity14%Templatec2dr1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:386aa long hypothetical serine aminotransferase; PDBTitle: crystal structure of the ph1308 protein from pyrococcus horikoshii ot3
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   139140.........150.........160.........170.........180.........190.........200........
Predicted Secondary structure 























Query SS confidence 





































































Query Sequence  PTGKAYVVQLGALKNADKVNEIVGKLRGAGYRVYTSPSTPVQGKITRILVGPDASKDKLKGSLGELKQLS
Query Conservation         

 

      
      
   
    
          


 


   
  
      
    
Alig confidence 










































.

























Template Conservation                       
   
   

 
  
       . 



     
 
 
   
  
   
Template Sequence  PGHESPTITAVLTPPGIKGDEVYEAMRKRGFELAKGYGSVKEK. TFRIGHMGYMKFEDIQEMLDNLREVI
Template Known Secondary structure  TT
B
SS

TT

TT


GGGTTT.

SS

Template Predicted Secondary structure 





















.





Template SS confidence 





































































   308.310.........320.........330.........340.........350 .........360.........370......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions