Job Description P09549 Confidence 27.60% Date Thu Jan 5 11:02:24 GMT 2012 Rank 55 Aligned Residues 75 % Identity 12% Template c2dh9A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein m; PDBTitle: solution structure of the c-terminal rna binding domain in2 heterogeneous nuclear ribonucleoprotein m Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	K	A	Y	V	V	Q	L	G	A	L	K	N	A	D	K	V	N	E	I	V	G	K	L	R	G	A	G	Y	R	V	Y	T	S	P	S	T	P	V	Q	G	K	I	T	R	I	L	V	G	P	D	A	S	K	D	K	L	K	G	S	L	G	E	L	K	Q	L	S	G	L	S	G	V	V	M	G
Query Conservation
Alig confidence																																																				.																	.
Template Conservation																																																				.																	.
Template Sequence		S	S	G	S	S	G	I	F	V	R	N	L	P	F	D	F	T	W	K	M	L	K	D	K	F	N	E	C	G	H	V	L	Y	A	D	I	K	M	E	N	G	K	S	K	G	C	G	V	V	K	.	F	E	S	P	E	V	A	E	R	A	C	R	M	M	N	G	.	M	K	L	S	G	R	E	I	D
Template Known Secondary structure			S									S			T	T												T	T	S											T	T				S						.		S	S											T	T	T	.			T	T	S
Template Predicted Secondary structure																																																				.																	.
Template SS confidence
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.		.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.		600	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions