Job Description P75962 Confidence 7.46% Date Thu Jan 5 12:16:31 GMT 2012 Rank 46 Aligned Residues 70 % Identity 11% Template c3j0cH_ PDB info PDB header:virus Chain: H: PDB Molecule:e2 envelope glycoprotein; PDBTitle: models of e1, e2 and cp of venezuelan equine encephalitis virus tc-832 strain restrained by a near atomic resolution cryo-em map Resolution 4.80 Å

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	F	R	P	T	P	D	Y	T	L	I	F	N	S	S	I	G	S	D	F	Y	E	D	S	E	G	D	K	V	N	V	Y	Y	S	P	G	H	P	E	K	A	E	I	N	N	P	W	V	N	F	F	K	W	G	F	I	G	I	M	G	V	I	F	I	A	V	G	L	L	I	S	M	P	S	S	K	K	S	R
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	E	F	V	W	G	N	H	P	P	K	R	F	W	A	Q	E	T	A	P	G	N	P	H	.	.	.	.	.	.	.	.	.	.	.	.	G	L	P	H	E	V	I	T	H	Y	Y	H	R	Y	P	M	S	T	I	L	G	L	S	I	C	A	A	I	A	T	V	S	V	A	A	S	T	W	L	F	C	R	S	R
Template Known Secondary structure							T	T	S											S	S					.	.	.	.	.	.	.	.	.	.	.	.		S	S	S	T					T	T	T	S	S		S	S	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.													350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		147	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		394	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions